Helicobacter pylori F16: HPF16_0162
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Entry
HPF16_0162 CDS
T01910
Symbol
recA
Name
(GenBank) recombinase A
KO
K03553
recombination protein RecA
Organism
hef
Helicobacter pylori F16
Pathway
hef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPF16_0162 (recA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hef03400
]
HPF16_0162 (recA)
DNA repair and recombination proteins [BR:
hef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPF16_0162 (recA)
RecFOR pathway proteins
HPF16_0162 (recA)
TLS (translesion DNA synthesis) factors
Other SOS response factors
HPF16_0162 (recA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
ATPase
Rad51
AAA_25
ATPase_2
AAA_24
AAA_16
CobU
ABC_tran
MobB
AAA_35
TK
AAA_14
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BAJ54759
LinkDB
All DBs
Position
169387..170430
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AA seq
347 aa
AA seq
DB search
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKG
RIIEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQP
DTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKIT
GVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKL
GQGRENAKALLKEDKALANEITLKIKESIGSNEEIMPLPDEPLEEME
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagatgaagacaaacaaaaagcgatttctttagcgatcaaacaaattgataag
gtttttggtaagggggcgttggtgcgccttggggataagcaagtagaaaagattgactct
atttctacaggctcgttaggattggatctggctttagggattgggggcgttccaaaaggt
aggatcattgaaatttatgggccagagtcaagcgggaagaccactttaagcttgcatatt
attgcagaatgccaaaaaaatggcggcgtgtgtgcgtttattgacgctgagcatgcctta
gatgtgcattacgctaagagattgggtgtggatacggaaaatctactcgtttcccaacct
gatacaggcgagcaagctttagagattttagaaacgatcactagaagtggagggattgat
ttagtggtggtggattccgtagcggctcttacgcctaaagcagagattgatggggatatg
ggcgatcagcatgtgggcttgcaagcaaggcttatgagccatgcgttaagaaaaatcacc
ggtgtcttgcacaagatgaacactactttaatttttatcaatcaaatcaggatgaagatt
ggcatgatgggttatgggagtccagagaccacaaccggaggtaatgccttaaaattctat
gcgagcgttaggattgatattagaaggattgcggctttaaaacaaaacgaacagcatatc
ggcaacagggctaaagccaaagtggttaaaaataaagtcgctccgccctttagagaagcg
gaatttgacatcatgtttggggaggggatttctaaagagggcgaaatcattgattatggc
gtgaaattagacattgtggataagagtggggcatggcttagctaccaggataaaaagcta
gggcaaggccgagaaaacgctaaagccttactgaaagaagacaaagccctagcgaatgaa
atcactcttaaaattaaagagagtattggttctaatgaagagatcatgcccttaccagat
gagcctttagaagaaatggaatag
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