Helicobacter pylori Gambia94/24: HPGAM_04860
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Entry
HPGAM_04860 CDS
T01917
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
heg
Helicobacter pylori Gambia94/24
Pathway
heg00470
D-Amino acid metabolism
heg01100
Metabolic pathways
heg01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
heg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPGAM_04860
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HPGAM_04860
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
heg01011
]
HPGAM_04860
Enzymes [BR:
heg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HPGAM_04860
Peptidoglycan biosynthesis and degradation proteins [BR:
heg01011
]
Precursor biosynthesis
Racemase
HPGAM_04860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
ZapC_N
Motif
Other DBs
NCBI-ProteinID:
ADU81787
LinkDB
All DBs
Position
complement(989276..990409)
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AA seq
377 aa
AA seq
DB search
MLKRASFVEVNTHSLRHNFDAVKSIVPKDACVMAVVKANAYGAGALKASEIFLQEGANYL
GVATLDEALELRSHFSKTPILILGYSPNTNASMLIDNDLSAMVFSLEQAEVFSQMALKSQ
KRLKVHLKIDTGMHRLGLEPTFKSIETIKKIRALKGLEVEGIFTHLSNADANIKTHAKNQ
MKAFNAFLEQLLNQKIEFKYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSSEMK
ESCPTILKNVISLKARIVQIKRVKKGELIGYGKHFYTNEETLVGVLALGYADGLVRALGN
RIQVAINNQLAPLIGKVCMDQCFVKLNNIEAKEGDEVILFGDKSAKANDASEIATLLNTI
PYETISTLSKRLERVYV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagggcgagttttgtagaagtgaacacccattctttaaggcataattttgat
gcagtcaaaagcattgtccctaaagacgcttgtgtcatggcggttgtcaaggcgaacgct
tatggagcaggggcattaaaagcgagcgaaatttttttacaagaaggggctaattattta
ggggtagcgaccttagatgaagctttagaattgcgctctcatttttctaaaacccctatt
ttgattttaggttatagccctaatactaacgcttccatgctgattgataacgatttgagc
gctatggtttttagccttgaacaagcggaagttttttctcaaatggctttaaagtctcaa
aaacgcttaaaagtgcatctcaaaattgataccggcatgcaccgcttgggtttagagcct
acttttaaaagcatagaaaccattaaaaaaatccgcgctttaaaaggcttggaagtggaa
gggatattcacgcatttaagcaacgctgatgctaacattaaaacccatgctaaaaaccag
atgaaagcctttaacgcttttttagaacagcttttaaatcaaaaaatagaatttaaatac
cgccatgcctataattctgccggcatcctttctttgtgtaacgggaatgaaaatcgtttg
ttaaacctttatcgcccaggcatcatgctctatggtttttacccttctagtgaaatgaaa
gaatcatgcccaaccatcttgaaaaatgttatcagtttaaaagcgcgaatcgttcaaatc
aaacgagtcaaaaaaggcgaattgattggctatggcaagcatttttacaccaatgaagag
actttagtgggcgttttagctctagggtatgcggacgggttggtgcgcgctttgggcaat
cgcattcaagtagcgatcaataaccaattagccccccttattggtaaggtgtgcatggat
cagtgctttgtcaaactcaataatattgaagccaaagagggcgatgaggtcattttgttt
ggggataaaagcgctaaagctaatgacgcaagcgaaatcgccacgcttttaaacaccatt
ccttatgaaaccattagcaccctatccaaacgcttggagcgcgtttatgtgtga
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