Helicobacter pylori Rif2: C730_00570
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Entry
C730_00570 CDS
T02318
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hei
Helicobacter pylori Rif2
Brite
KEGG Orthology (KO) [BR:
hei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hei03032
]
C730_00570
03400 DNA repair and recombination proteins [BR:
hei03400
]
C730_00570
Enzymes [BR:
hei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C730_00570
DNA replication proteins [BR:
hei03032
]
Prokaryotic type
DNA Topoisomerases
C730_00570
DNA repair and recombination proteins [BR:
hei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C730_00570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
DUF1272
Zn-ribbon_8
zf_Rg
Lar_restr_allev
LysW-like_globular
Motif
Other DBs
NCBI-ProteinID:
AFV44524
LinkDB
All DBs
Position
124660..126870
Genome browser
AA seq
736 aa
AA seq
DB search
MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDH
KELVKQIIELSKKASITYIATDEDREGEAIGYHVACLIGGKLESYPRIVFHEITQNAILN
ALKTPRKIDMSKVNAQQARRFLDRIVGFKLSSLIASKITKGLSAGRVQSAALKLVIDKER
EIKAFKPLTYFTLDAYFESHLEAQLISYKGNKLKAQELIDEKKAQEIKNELEKESYAISS
IVKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRT
DSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSIILEPNALK
DYLKPEELRLYTLIYKRFLASQMQDALFESQSVVVACEKGEFKASGRKLLFDGYYKILGN
DDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISL
LQNRDYIKVEKKQISALESAFKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQV
LKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFIACNNYPKCKY
VKQTESANDEADQELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNAKETIEG
VKCPECGGDIALKRSKKGSFYGCNNYPKCNFLSNHKPINKRCEKCHYLMSERIYRKKKAH
ECIKCKERVFLEEDNG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccttattatcgtagaatcccccgcaaaagccaaaaccattaaaaattttttg
gataaaaattatgaagtcattgcctctaaagggcatgttagggatttatccaaattcgct
ttaggcattaagattgatgaaaccggcttcactcctaattatgtcgtggataaagaccat
aaagagcttgtcaaacagatcatagagctttctaaaaaggcatctattacttatatcgct
accgatgaagacagagagggggaagcgataggctatcatgtggcatgtttgattgggggg
aaattggagagctatcctaggattgtttttcatgagatcacgcaaaatgcgatcttaaac
gctctaaaaaccccacgaaaaattgacatgtctaaggtcaacgcccaacaagccagacgc
tttttagatcgaatcgtgggttttaaactcagctcgttgattgcatcaaaaatcactaaa
ggtttgagcgctggacgggtgcaaagcgcggctttaaagcttgtgattgataaagagagg
gagatcaaagcctttaagcctttaacctacttcacgctagacgcttattttgagtcgcat
ttagaagcgcaactcattagctataagggcaacaaactcaaagcccaagaactcattgat
gaaaaaaaagctcaagagattaaaaacgaattagaaaaagaaagctacgctatctccagt
atcgttaaaaaatctaaaaaatcccccacgccgccccctttcatgacttctactttacag
caaagcgcttctagtcttttaggcttttcgcccacaaaaaccatgagtatcgctcaaaaa
ttgtatgagggcgtagccaccccacaaggggttatgggggtgatcacttacatgaggacc
gatagcttgaatatcgctaaagaggctttagaagaagcgaggaataagattttaaaagac
tatggcaaagactatttaccccctaaagccaaagtctattccagcaagaataaaaacgcc
caagaagcccatgaagcgatcaggcccacttctattattttagagccaaacgctttaaaa
gactaccttaagcctgaagaattaaggctctataccttaatttacaaacgctttttagct
tctcaaatgcaagacgctctttttgaaagccaaagcgtggttgtggcttgcgaaaaaggc
gagtttaaagcgagtgggagaaagctcctttttgatggctattataaaattttaggcaat
gacgataaggacaaattgctccccaatttgaaagaaaatgaccccattaaattagaaaaa
ctagagagcaacgcccatgttacagaacctccagcacgctattctgaagcgagcttgatt
aaagttttagaaagtttaggcataggcaggcccagcacctacgccccaacgatttccctt
ttacaaaacagagactacatcaaggtagaaaaaaagcaaatcagtgctttagagagcgct
tttaaggtgatagaaattttagaaaagcattttgaagaaatcgtggattccaaattcagc
gcttctttagaagaagaattggacaatatcgctcaaaataaagccgactaccagcaagtc
ttaaaggacttttactacccctttatggataaaattgaagctgggaaaaagaatatcatc
tctcaaaaagtgcatgaaaaaaccggtcaatcatgccctaaatgcggtggggaattagtc
aaaaaaaatagccgttatggggagtttatcgcttgcaacaattaccctaaatgcaaatat
gtcaaacaaactgaaagcgctaatgatgaagccgatcaagaattgtgcgaaaaatgcgga
ggggaaatggtgcaaaaattcagcagaaacggggcgtttttagcttgcaacaattaccct
gaatgcaaaaacaccaaatcgttaaaaaacacccctaacgcaaaagaaacaatagaaggc
gtgaaatgcccagaatgcggaggggatattgctttaaaaaggagtaagaaaggctcgttt
tatggctgtaacaattaccctaaatgcaattttttatccaaccataagcccatcaacaag
cgttgcgagaaatgccattatttaatgagtgaaagaatctatcgcaaaaaaaaggcgcat
gaatgcattaaatgtaaagaacgcgtgtttttagaggaagataatggctaa
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