KEGG   Helicobacter pylori BM012S: U064_0034
Entry
U064_0034         CDS       T02940                                 
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA
  KO
K03694  ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
hez  Helicobacter pylori BM012S
Brite
KEGG Orthology (KO) [BR:hez00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:hez03110]
    U064_0034
Chaperones and folding catalysts [BR:hez03110]
 Heat shock proteins
  HSP100
   U064_0034
SSDB
Motif
Pfam: AAA_2 AAA AAA_lid_9 ClpB_D2-small AAA_5 AAA_16 AAA_22 nSTAND3 Sigma54_activat AAA_7 RuvB_N NACHT AAA_14 Mg_chelatase TniB IstB_IS21 RNA_helicase AAA_18 AAA_25 ATPase_2 RsgA_GTPase ResIII AAA_3 AAA_28 AAA_33 PhoH Clp_N AAA_8 DNA_pol3_delta2 TIP49 AAA_15 nSTAND1 ArsA_ATPase Torsin DUF5805 DUF815 UTP15_C AAA_6 Ead_Ea22
Other DBs
NCBI-ProteinID: AHA88986
UniProt: V5NKM8
LinkDB
Position
32460..34685
AA seq 741 aa
MAKFNQDLNEVLNQALNLALDLNHALCTTEHVLLVILEHESGEKIVGALERDDYDKLKQI
LKDYLLQYVPLKSDPAKMPARSFVLLRMLKRMYASGFESVGVEELLILMLDHPDCYASKL
MDSFGIARLYSNPALLDLDNHGIPNDINDNEEAPKNTPLKKYAKNLSALAQDNALDPVIG
REEEILRVIEILGRRKKNNPLLIGEAGVGKTSIAEALALKIAQKEVPEFLQEYEVYSLDL
ALMVAGAKYRGDFEKRLKKTLKEIQENGRIILFIDEIHTLLGAGSSNAGSLDAANILKPV
LTDGSLKCLGATTFEEYRSVFEKDKAFNRRFSVIKVEEPSKEACYLILKKIAPLYEEHHQ
VRYDESVFKACVDLTSDYMHDKFLPDKAIELLDEVGSRKKISPKKGKKIGVDDVKETLAL
KLKIPKMRLSSDKKALLRNLEKSLKNKIFAQAEAISLVSNAIKIQHCGLSAKNKPVGSFL
FVGPSGVGKTELAKELALNLNLHFERFDMSEYKEAHSVAKLIGSPSGYVGFEQGGLLVNA
IKKHPHCLLLLDEIEKAHSNVYDLLLQVMDNATLSDNLGNQASFKHVILIMTSNVGSKDK
DTLGFFSAKNTKYDKAVKELLTPELRSRIDAIVPFNALSLEDFERIVSVELDKLKALALE
QDIALKFHKEVLKSIAQKSYQTTLGAREIKKIIHNEIKTPLSDLLLLQSFKKPCKIACLL
EKNQLVLKEIKRAQKVKENDF
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggctaaattcaatcaagatctcaatgaagttctaaaccaagctttaaatttagcccta
gatcttaaccacgccctttgcaccacagagcatgtgctactagtcattttagagcatgag
agcggggaaaagattgttggcgctttagaaagagatgactatgataaattaaaacaaatc
cttaaagactatttgttgcaatatgtgcctttaaagagtgatccagccaaaatgcctgct
aggagttttgtgctgttaagaatgcttaaaagaatgtatgcgagtggttttgagagcgtg
ggcgtggaagaattgcttattttaatgctggatcaccccgattgttacgcttcaaaactc
atggatagttttggcatcgctcgtttgtattctaatcctgctttattggatttggataac
catggcattcctaacgacattaatgataatgaagaagcgcccaaaaacacccccctaaaa
aaatacgctaaaaatttgagcgctttagcccaagataacgctttagatccagtcattggc
agagaagaagagattttaagagtgatagaaattttagggcgcagaaaaaagaataacccg
cttttaattggcgaagcgggcgtagggaaaacctccatcgctgaagctttggctttaaaa
atcgctcaaaaagaagtgccggagtttttgcaagaatatgaagtctattctttggatttg
gctttaatggtggctggggcaaaatacagaggggattttgaaaaacgcttgaaaaaaacg
ctcaaagaaatccaagaaaacggccgcatcattttattcattgatgaaatccacaccctt
ttaggcgcagggagcagtaacgctgggagcttggatgcggcgaatatattaaaaccggtt
ctaacggatgggagcttgaaatgtttaggagcgaccacttttgaagaataccgcagcgtc
tttgaaaaagacaaggctttcaacaggcgtttttcagtcataaaagttgaagagccttct
aaagaggcgtgttacttgattttaaaaaagatcgctcccctttatgaagaacaccaccag
gtgcgttatgatgagagcgtgtttaaggcatgcgtggatttaacgagtgattacatgcat
gataaattcttgccggataaagcgattgaattattagatgaggtgggatcgaggaaaaaa
atcagccctaaaaagggtaaaaaaatcggcgttgatgatgtgaaagaaacgctcgctctc
aagcttaaaatccctaaaatgcgtttgagcagcgacaaaaaagcccttttaaggaactta
gaaaaatcgcttaaaaataagatttttgcccaagcagaagcgatcagtcttgtcagcaat
gcgattaaaatccagcattgcgggctttctgcaaaaaataagcctgtggggagcttttta
ttcgtggggcctagtggggtggggaaaacagagttggctaaagaattggccttgaatttg
aatttgcattttgaacgctttgacatgagcgaatacaaagaagcccatagcgtggcaaag
cttatcgggagtcctagcggttatgtggggtttgagcaaggggggctgttggtgaatgcg
attaaaaaacacccgcattgtttgctgcttttagatgagatagaaaaagcccactctaat
gtgtatgatttgttgttgcaagtgatggataacgccactttgagcgataatttaggcaat
caggcgagttttaagcatgtgatactgattatgacttcaaatgtggggagtaaggataag
gacacgctagggttttttagcgctaaaaacaccaagtatgataaagccgttaaagagctt
ttgacccctgaattacgatccaggattgatgcaatcgtgccgtttaacgcgctcagtttg
gaggattttgaacgcattgtctctgtggaattagacaaattaaaagccctagcgctagag
caagacatagccttaaagttccataaagaagttttgaaatccatcgcacaaaaaagctat
caaacgactttaggagcgagggaaattaaaaaaatcattcacaatgagatcaaaacccca
ttaagcgatctactgctcttgcaatcgtttaaaaaaccttgtaagatcgcttgcttgcta
gaaaaaaaccaattggttttaaaagaaatcaagcgcgcgcaaaaggtgaaagaaaatgac
ttttga

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