Herbaspirillum frisingense: G5S34_12420
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Entry
G5S34_12420 CDS
T06761
Name
(GenBank) ATP-dependent DNA ligase
Organism
hfr
Herbaspirillum frisingense
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QNB07493
UniProt:
A0A7G6AWV9
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Position
complement(2739070..2740767)
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AA seq
565 aa
AA seq
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MREFSRLYAELDATTSTTRKLAALQDYFQRADAADAAWAVYFLAGGKPRQAVPTGLLKQC
AMAYAQIDEWLFEECYHSVGDLAETIAHILPPPTRTSDFGLAYWMQERIAPLRGAEPEVI
RSALFAAWDELDWQGRFLLAKLIGGGFRVGVSRLLVTRALAAVAQLDPKLLAQRMVGWTD
GRARPDAERFARLIGPDDGQDHRLQGGQPYPFFLAHPLIEHPRQLGPVGQWQIEWKYDGI
RAQLVRRHGSNWLWSRGEELITERFPELAALDLPDGTVIDGEIVIRLPDSGHQAERVAPF
ADLQKRIGRKNLTARMLGELPAGLIAYDLLEQDGHDLRGLPQQERRTRLEQLVQRHAAPA
LMLAPQIVAANWDALEQLRATSRQRGVEGMMLKQVDAHYGIGRTRNVGTWWKWKVDPYSI
DAVLIYAQAGHGRRASLYTDYTFAVWDTPAEAGGERKLVPFAKAYSGLTDAEIAVVDQTI
RKTTIEKFGPVRSVRPSMVFEIGFEGIALSTRHKAGIAVRFPRILRQRVDKTVDQADTLD
NLRALLPSSPVNESEEDAQPAQQDH
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaattttcgcggctctacgccgaactggatgccaccacctccaccacccgcaag
ctggcggccttgcaggactacttccagcgtgccgatgcggccgacgccgcctgggcggtg
tatttcctggccggcggcaagcctcgccaggcggtgccgaccggcctgctcaagcaatgc
gcaatggcctatgcgcagatcgatgaatggctcttcgaggagtgctatcacagcgtgggc
gacctggccgaaaccattgcccacatcctgccgccaccgacccgcaccagcgacttcggg
ctggcctactggatgcaggaacgcatcgcccccctgcgcggtgccgaaccggaagtgatc
cgcagcgccctcttcgcggcctgggatgaactggactggcagggccgcttcctgctcgcc
aagctcatcggtggcggcttccgggtgggcgtctcgcgcctgctggtcacccgggcgctg
gccgccgtggcgcagctggaccccaagctgctggcccagcgcatggtcggctggaccgat
ggccgcgcccgccccgacgccgaacgcttcgcccgcctgatcggccccgatgacggccag
gaccatcgcctgcagggcggccagccctaccccttcttcctggcccatccgctgatagag
catccgcgccagctggggccggtcggtcagtggcagatcgaatggaaatacgacggcatc
cgcgcccagctggtgcgccggcacggcagcaactggctgtggtcacgcggggaagagctg
atcaccgaacgtttccccgaactggccgcgctggacctgccggacggtaccgtcatcgac
ggcgagatcgtgatccgcctgcctgattccgggcaccaggccgaacgcgtggcgcccttc
gccgacctgcaaaaacgcatcggtcgcaagaatctcactgcaagaatgctgggcgagctg
cccgccggactgatcgcctatgacctgctggagcaggatgggcatgatctgcgcggcctg
cctcagcaagaacgccgcacccggctggaacaactggtccagcgccacgccgcgccggcc
ctgatgctggcgccacagatcgtggcagcgaactgggatgcgctggaacaactgcgcgcc
acctcgcgccagcgcggcgtggagggcatgatgctcaagcaggtcgacgcccactatggc
atcggccgtacccgcaacgtcggcacctggtggaagtggaaggtcgatccctattccatc
gatgccgtcctgatctatgcccaggccggtcacggccggcgcgcctcgctctataccgac
tacaccttcgcggtctgggacactcccgctgaagccggcggtgagcgcaagctagtgccc
ttcgccaaggcctattcgggcttgaccgatgccgagatcgcggtggtcgaccagaccata
cgcaagaccacgatagaaaaattcggaccggtacgcagtgtgcggccgtccatggtgttc
gagatcggcttcgagggcattgccctgtccacgcgccacaaggccggcattgccgtgcgc
ttcccgcgcatcctgcgccagcgcgtcgacaagaccgtcgaccaggccgataccctggac
aacctgcgcgccctgctgccgtcgtccccagtcaacgagagcgaggaagatgcccagccc
gcccagcaagaccactag
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