KEGG   Heterocephalus glaber (naked mole-rat): 101697993
Entry
101697993         CDS       T02812                                 
Symbol
Syvn1
Name
(RefSeq) synoviolin 1
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl04120  Ubiquitin mediated proteolysis
hgl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101697993 (Syvn1)
   04120 Ubiquitin mediated proteolysis
    101697993 (Syvn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hgl04121]
    101697993 (Syvn1)
Enzymes [BR:hgl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101697993 (Syvn1)
Ubiquitin system [BR:hgl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101697993 (Syvn1)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 zf-RING_11 zf-RING_5 zf-RING-like zf-ANAPC11 zf-HC5HC2H zf-C3H2C3 zf-Nse Endonuclease_7 Prok-RING_4
Other DBs
NCBI-GeneID: 101697993
NCBI-ProteinID: XP_004852476
LinkDB
Position
Un
AA seq 611 aa
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQNENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEASAPPSTSAAALSRPSGT
ATTIAAGSSASGPVPGSAPAPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLT
PEELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVSPTEE
TASTAVAAASISTPSSEATTPSPEASSPAQETEKPPAPESVGTEELPEDGEPDAAELRRR
RLQKLESPVAH
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgttccgcaccgcagtgatgatggcggccagcctggcattgactggggctgtggtggca
cacgcctactacctcaaacaccagttctaccccacggtggtgtacctgaccaagtccagc
cctagcatggcagtcctgtacatccaggccttcgtccttgtcttcctcttgggcaaggtg
atgggcaaggtgttctttgggcagctgagggcagcggagatggagcaccttctggagcgt
tcctggtatgccgtcactgagacgtgtctggccttcaccgtttttcgggatgacttcagt
ccccgctttgttgcgctcttcactctcctcctcttcctcaagtgtttccactggctggct
gaggaccgtgtggactttatggaacgaagccctaatatctcctggctctttcactgccgc
attgtctccctcatgttcctcctgggtatcctggacttcctcttcgtcagccacgcctat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtacgccatt
ctgatgactatggtgcttaccatcttcatcaagtatgtgctgcactctgtggacctccag
aacgagaatccctgggacaataaggccgtgtacatgctctacacggagctgttcacaggc
ttcatcaaggttctgctttacatggcctttatgaccatcatgatcaaggttcacactttc
ccgctctttgccatccggcccatgtacctggccatgaggcagttcaagaaagctgtgaca
gatgccatcatgtcacgacgagccatccgcaacatgaacacactgtatccagatgccacc
cctgaggaactccaggcaatggacaatgtctgcatcatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacatctttcataccagctgcttgcgctcctggttc
cagaggcagcagacctgccctacttgccgcatggatgtcctgcgggcatcactgccagcc
cagtcaccaccaccccctgagcctgcggatcaggggccaccccctgcccctcatccccca
ccactcttgcctcagccccctaacttcccccagggcctcctgcctccttttcctccaggc
atgttccccctgtggccccccatgggcccattccctcctgtcccacctcctccaagctca
ggagaggcctcggcccctccgtccaccagtgcagcggccctttctcggcctagtggaaca
gccacaactatagctgccggcagcagtgcctctggcccagtgcctggctctgcccctgcc
ccagaggctggccctgccccaggcttccccttccctcctccctggatgggcatgcccctg
cctccaccctttgccttcccccctatgcctgtgccccctgcgggctttgctgggctgacc
ccagaggagcttcgggctctggaaggccatgagcgacagcacctggaggcccggctgcag
agcctgcgcaacatccacacgctgctggacgccgccatgctgcagatcaaccagtacctc
actgtgctagcctccttggggcccccccggcctgccacttcagtcagccccacagaagag
actgcttccacagcagttgctgctgcctccatcagcacccccagctctgaggccaccaca
ccatccccagaagcctcctcaccagcccaggaaactgaaaagcctccagctcctgagtct
gtgggcaccgaggagctacctgaagatggagagccagatgctgcagagctccgccggcgc
cggctgcaaaagctcgagtcccctgttgcccactga

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