Heterocephalus glaber (naked mole-rat): 101707612
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Entry
101707612 CDS
T02812
Symbol
Upf2
Name
(RefSeq) UPF2 regulator of nonsense transcripts homolog (yeast)
KO
K14327
regulator of nonsense transcripts 2
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03013
Nucleocytoplasmic transport
hgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101707612 (Upf2)
03015 mRNA surveillance pathway
101707612 (Upf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101707612 (Upf2)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101707612 (Upf2)
mRNA cycle factors
P-body specific factors
101707612 (Upf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
101707612
NCBI-ProteinID:
XP_004854624
LinkDB
All DBs
Position
Un
AA seq
1268 aa
AA seq
DB search
MPAERKKSASMEEKESLLNNKEKDCSEKRPVNSKEKPKDDLKITAKKEVSKVPEEKKKKL
EEDKKKKEDKERKKKEEEKVKAEEELKKKEEEKKKHEEEERKKQEEQAKRQQEEEAAQLK
EREESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTIT
EQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLLQ
VWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRESH
THVSVVISFCRHCGDDIAGLIPRRVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFTS
LTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDE
NMPDLPQDKPTPEEHGPGIDIFTPGKPGDYDLEGGIWEDEDARNFYENLIDLKAFVPAIL
FKDNEKSCQNKESNKDDSKEAKEPKDNKEVSNPDDLELELENLEINDDTLELEGGDEAED
LTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRK
KLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIET
KNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHL
RTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKD
LSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVG
IHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVN
PDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVW
TKDHPFPIDIDYMISDTLELLRPKIKLCNSLDESIRQVHELEQEYLIKLGLVNDKDSKDS
VTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEVSDNDDDEGEEEEEENTDYLTDS
NKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAI
PLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQ
QAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNAD
LIFKTGGR
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagtcagcaagtatggaagaaaaagaatctttgctaaacaac
aaagagaaagactgcagtgaaaagcggccagtgaacagcaaggaaaaaccaaaagacgat
ctcaagatcactgccaagaaagaggtcagtaaggtccccgaagagaaaaagaagaaacta
gaagaagataagaagaaaaaggaagacaaagaacgcaagaaaaaagaagaagaaaaggtg
aaagcagaggaagaattaaagaaaaaagaagaagaaaaaaagaaacatgaagaggaagag
agaaaaaagcaggaagagcaagcaaaacgtcagcaagaagaagaagctgctcagttaaaa
gagagggaagaatcccttcagcttcatcaggaagcttgggaacgacatcagttaagaaag
gagcttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttctttagc
cgcctggactcaagtttgaagaaaaatactgcttttgtcaagaaactaaaaactattaca
gaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatacatt
gcagaggctgtagcttccattgtagaagccaaactaaaaatctctgatgtgaactgtgct
gtgcacctgtgttctctctttcaccagcgctatgctgactttgccccctcacttcttcag
gtctggaaaaaacattttgaagcaaggaaagaggagaaaactcctaacattaccaagcta
agaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaaggaa
ggtctttccttaatctatgaacagctgaaaaatattattaatgctgatcgagaatcccac
actcatgtttctgtggtgattagtttctgtcgccattgtggagatgatattgctggactt
ataccaaggagagtaaagagtgctgcagagaagtttaatttgagttttcctcctagtgag
ataattagtccagagaaacaacaacctttccagaatcttttgaaagagtactttacgtct
ttgaccaaacacctgaaaagggaccacagggagctccagaatactgagagacaaaacagg
cgtattctacattctaaaggggaactaagtgaagatagacataaacaatatgaagaattt
gctatgtcttatcagaagttgctggcaaattctcaatccttagcagaccttttggatgaa
aatatgccagatcttcctcaggataagccaacaccagaagagcatgggcctgggattgat
atattcacacctggtaaacctggagattatgacttggaaggtggtatatgggaagatgaa
gatgctcggaatttttatgagaaccttattgatttgaaagcttttgttccagccatcttg
tttaaagataatgaaaaaagttgtcagaacaaagagtctaacaaagatgattccaaagag
gcaaaggaacctaaggataataaggaggtatcaaatcctgatgatttggaacttgagttg
gaaaacctagaaattaacgatgacactttggagttagaaggtggggatgaagctgaagat
cttacaaagaaacttcttgatgaacaagaacaagaggatgaagaagccagcactggatct
catctcaagctcatagtagatgctttccttcagcagttgcccaactgtgtcaaccgagat
ctgatagacaaggcagcaatggatttttgcatgaacatgaacacaaaagcaaacaggaag
aagttggtacgagcactcttcatagttcctagacaaaggttggatttgctaccattttat
gcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgttcc
atgctgaggggggatttcagatttcatgtgcgaaaaaaggaccagatcaatattgaaaca
aagaacaaaactgttcgttttattggagaactaactaagtttaagatgtttacaaaaaat
gatacgctccattgtttgaagatgcttctgtcagacttttctcatcatcatattgaaatg
gcttgtactctactggagacatgtggacggtttctttttagatctccagaatcacacctg
aggaccagtgtacttttggagcaaatgatgagaaagaaacaagcaatgcatcttgatgca
agatacgtgacaatggtggaaaatgcttattactactgcaacccacctccagctgaaaag
acagtgaaaaagaaacgtcctcccctccaggaatatgtccggaaacttttgtataaggat
ctctctaaggtcactactgaaaaggttttgagacagatgcgaaagttgccctggcaggac
caagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtgaaatacaat
agtattcattgtgtagccaaccttttagcaggactagtgctctaccaagaagatgttggt
atccatgttgtagatggagttttagaagatattcgattgggaatggaggtcaatcaacct
aaatttaatcagaggcgtatcagcagtgctaagttcttaggggaactttataattaccga
atggtggaatcagctgttattttcagaactctctattcatttacttcattcggtgttaac
cctgatggctctccaagttcactggaccctcctgagcatcttttcagaattagactagta
tgcactattttggatacctgtggccagtactttgacagaggttccagtaaacgaaaactt
gattgcttccttgtatattttcagcgttatgtttggtggaagaaaagtttggaggtttgg
acaaaagaccatccatttcctattgatatagattacatgatcagtgatacactagaactg
ctaagaccaaagatcaaactctgtaattctctggatgaatccatcaggcaggtacacgaa
ctggaacaagaatacttaataaaactaggcctagtaaatgacaaagactcaaaagattct
gtgacagaaggagaaaatcttgaagaagatgaagaagaagaagaagggggagctgaaaca
gaagaacagtctggaaatgaaagtgaagtaaatgagccagaagaagaggaggtttctgat
aatgacgatgatgaaggagaagaagaggaagaagagaatacagattaccttacagattcc
aacaaggagaatgaaactgatgaagagaatactgaggtaatgattaaaggaggtggacta
aagcatgtgccttgtgtagaagatgaggacttcattcaagctctggataaaatgatgcta
gaaaatcttcagcaacgaagtggtgaatctgttaaagtgcaccagcttgatgttgctatt
cctttgcatctcaaaagccagctgaggaaagggcctcctcttggtggtggggaaggagag
gcagagtctgcagacacgatgccatttgtcatgctaacaagaaaaggaaataaacagcag
tttaaaatcctcaatgtgcccatgtcatcccaacttgctgcgaatcattggaaccagcaa
caggcagaacaagaagagaggatgagaatgaaaaagctcacactagatatcaatgaacgg
caagaacaagaagattatcaagaaatgctgcagtctcttgcccagcgcccagctccagca
aacaccaatcgtgagcggcggcctcgttaccaacatccaaagggagcacctaatgcagat
ctaatctttaagactggtgggaggtaa
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