Heterocephalus glaber (naked mole-rat): 101708442
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Entry
101708442 CDS
T02812
Symbol
Hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl04613
Neutrophil extracellular trap formation
hgl05014
Amyotrophic lateral sclerosis
hgl05034
Alcoholism
hgl05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
101708442 (Hdac6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101708442 (Hdac6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101708442 (Hdac6)
09165 Substance dependence
05034 Alcoholism
101708442 (Hdac6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hgl01009
]
101708442 (Hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101708442 (Hdac6)
04131 Membrane trafficking [BR:
hgl04131
]
101708442 (Hdac6)
03036 Chromosome and associated proteins [BR:
hgl03036
]
101708442 (Hdac6)
Enzymes [BR:
hgl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101708442 (Hdac6)
Protein phosphatases and associated proteins [BR:
hgl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101708442 (Hdac6)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101708442 (Hdac6)
Membrane trafficking [BR:
hgl04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101708442 (Hdac6)
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101708442 (Hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101708442
NCBI-ProteinID:
XP_012923668
LinkDB
All DBs
Position
Un
AA seq
1101 aa
AA seq
DB search
MTSTGQDSTTTRLRRSRHNPQSPLHDSSVTWKRSIKKGAVPRSSPSLAEVKKKGKMKKLG
QAAEDDLIMGLQGLDMNPEAKVLVGTGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEFIDLMETTQHMNERELRLLADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQK
KHRIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDAIQGDPKGEMATTP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHILLGDPCPMLESPGAPCPSA
QASISSTLEALEPFWEVLVRPAETPEEDSVAEDGVQEIQEEGPWEPPVLPILTWPLLQAR
TGLIYDERMMSHCNLWDSHHPETPQRILRIMCHLEELGLAGRCVTLPVRPATEAELLTCH
SAEYVERLRATEKMKTRELHREGANFDSIYICPSTFTCAQLATGSACRLVEAVLSGEVLN
GVAVVRPPGHHAEQDTACGFCFFNSVAVAARHAQAISGHAMRILIVDWDIHHGNGTQHIF
EDDPSVLYVSLHRFDRGTFFPMGDEGASSQVGKAAGTGFTVNVAWNGPRVGDAEYLAAWH
RLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEG
GYNLTSISESMAACTHALLGDLSPQLALLRPPQSGALASITETIQVHRRYWRSLRVTRKV
LEAGMRKPTSALSTEESSPGQTKPEAAKVVLTRDQSSETATGRATLEKGPSASEDAVGGA
ELNQTPQASCTEKQTSAASPVPGATALLPPSQLTGNPKTLELGKEALETLEPQALGEESL
LGEAAGGQDVDDSQLTQGFQDLADTNQDILHAVTPLLWCPHLVAVRPMSAANLDVTQPCK
DCGTLQENWLCLSCYQVYCSRYVNAHMVRHHEVSGHPLVLSYIDLSTWCYPCQAYVHHQD
LLDVKNITHQKKFGEDMPHPH
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaagattccaccacaaccaggcttcgaaggagtaggcacaacccc
cagtcgccccttcacgactccagtgtcacttggaagcgaagtattaagaagggtgctgta
ccccgctccagccccagtctagcagaggtgaagaagaagggcaaaatgaagaaactcggt
caagcagcggaagatgacctaatcatgggtcttcaagggctggatatgaaccctgaggcc
aaggtccttgttggcactgggctggtgttcgatgagcagctaaatgaattccattgcctc
tgggatgacagcttccctgaacgtcctgagcggctccatgccatcaaggagcagctgatc
caggaagggctcctggatcgctgtgtgtcctttcaggcccgctttgctgaaaaggaagag
ctgatgttggttcacagcctagaatttattgacctgatggaaacgacccagcatatgaat
gagagagaactccgactactagcggatacctatgactcagtttatctgcatccgaactct
tacacctgtgcctgcctggcctcaggctctgtccttaggctggtggatgcggtcctgggt
gctgagatacggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt
cttatggatgggtattgcatgttcaaccatgtggctgtggctgcccgctacgctcaaaag
aagcaccgcattcagagggtccttattgtggactgggatgtgcaccatggtcaaggaaca
cagttcacttttgatcaggaccccagtgtcctctatttttccatccatcgttatgagcag
ggtcggttctggccccaccttaaggcctctaactggtctactactggttttggccagggt
caaggttacaccatcaatgtgccttggaaccaggtggggatgcgggacgctgactacatt
gctgcttttctgcacatcctgctaccagttgcctttgagttccagcctcagctggtccta
gtggctgctggatttgatgccatacaaggggatcccaagggtgagatggccaccactccg
gcagggttcgcccagctaacccacttgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctacaaccttcgctccctggctgagggcgtcagtgcatcactccac
atccttctgggagatccttgccccatgctggagtcccccggtgccccctgccccagtgcc
caggcttcaatctcctccactctggaagcccttgagcctttctgggaggttcttgtgaga
ccagcagagaccccagaggaggacagtgtagcggaggatggtgtgcaggagatccaggag
gaaggaccctgggaaccccctgtgctgccaatcctgacctggcccttgctacaggcacga
actgggctgatttatgacgagcggatgatgagtcactgcaacttatgggacagccaccac
cctgagacaccccagcgcatcctgcggatcatgtgccacctggaggagctgggccttgcc
gggcgctgcgtcaccctgcctgtgcggcctgccacggaggcggagttgctcacctgccac
agtgccgaatatgtggagcgcctccgagcaactgagaagatgaaaacccgagagctgcac
cgggagggcgccaactttgactccatctacatctgccccagcaccttcacctgtgcacag
cttgctacgggctctgcctgccgccttgtggaggctgtgctctcaggagaggttctgaat
ggtgtggccgtggttcgccccccagggcaccatgcagagcaggacactgcctgcggtttc
tgctttttcaactctgtggctgtggctgctcgccatgcccaggccatcagtgggcatgcc
atgcgaatcctgatcgtggattgggacatccatcatggtaatggaactcagcacatattt
gaggatgaccccagcgtgttatatgtgtccctgcaccgctttgaccgaggcaccttcttt
cccatgggggacgagggtgccagcagccaggtgggcaaggctgcaggcacaggcttcacc
gtcaatgtggcctggaatgggccccgagtgggtgatgctgagtacctggctgcctggcat
cgcctggtgcttcccattgcctatgagtttaacccggaactggtactggtctcagctggc
tttgatgcggcacgaggggacccactagggggctgccaggtgtcacccgaaggttatgcc
catctcacccacctgttgatgggccttgccaatggtcgcatcatccttatcctagagggt
ggctacaatctgacatccatctcagaatccatggctgcctgtactcacgcacttcttgga
gacctgtcaccccagctggctctgctgcggcctccacagtctggggctctggcctccatc
actgagaccatccaagtccatcgaagatactggcgcagcttacgagtcacaaggaaggtt
ctggaagcaggcatgaggaagccaacctcagcattatctacagaagagtccagtccaggc
cagactaaaccagaggcagctaaagtggtgctcactcgggaccagtcctcagagacagcc
actggaagagccaccctggagaaaggcccatcagcctcagaggacgctgtgggaggagct
gagctgaaccaaactcctcaagcctcatgtacagaaaagcagacctcggcagcctcacct
gtgccaggagccacagccctgctccctcccagtcagctgactgggaatcctaagaccttg
gaactaggcaaggaagctctggagaccctggaacctcaggcccttggagaggagagccta
ctaggagaggcagctggaggtcaggatgtggatgactcacagctgacacagggatttcag
gaccttgctgacactaaccaggacatattacatgctgtgacaccactgctctggtgtccc
catctggtagcagtacgccccatgtctgcagcaaacctggacgtgacccaaccctgtaag
gactgtggaacactccaggagaactggttgtgtttgtcctgctatcaggtctactgcagt
cgttatgtcaacgctcatatggtccgacaccacgaagtatctggacacccgctagtcctc
agctacatcgatttgtctacctggtgttacccttgtcaggcctatgtccaccaccaggat
ctcctagatgtgaagaacatcacccatcagaagaagtttggggaggacatgcctcaccca
cactaa
DBGET
integrated database retrieval system
