Heterocephalus glaber (naked mole-rat): 101718648
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Entry
101718648 CDS
T02812
Symbol
Acin1
Name
(RefSeq) apoptotic chromatin condensation inducer 1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03013
Nucleocytoplasmic transport
hgl03015
mRNA surveillance pathway
hgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101718648 (Acin1)
09122 Translation
03013 Nucleocytoplasmic transport
101718648 (Acin1)
03015 mRNA surveillance pathway
101718648 (Acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101718648 (Acin1)
03041 Spliceosome [BR:
hgl03041
]
101718648 (Acin1)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101718648 (Acin1)
Spliceosome [BR:
hgl03041
]
Complex C
Other components
EJC/TREX
101718648 (Acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
101718648
NCBI-ProteinID:
XP_004864238
LinkDB
All DBs
Position
Un
AA seq
1332 aa
AA seq
DB search
MRPRKHPNNFGGTXGVLSGNRGVGYSSGRGQLSTFXGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSTLVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSNNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKGSSVSEEKGESDDEKPRKGERRSSRVRQARAAKLS
EYSQAAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEEEEEDEGQKSGEAPILRQF
EEGEEMSRAKPEEVMDERPKTIRSQDQERLERGGRVTRSQEEARRGQLARQQQEKDIQTV
SPLEEEEREIKSSQGLVKKSQSPSPPRLTEDLGKASLVLQPEQAASEEETPPPLLTKEAS
SPPPHTQLQSEEEIEPMEGPAPPVLIQLSPPSADAETREHTLQVVGGLSPLSSPTDTKAE
SPAEKVSEESVLPLVQKSTLAEYSTPKGHEAESQKSAQPFSLKMEELTPAKEITDESLKQ
QCLEQTEGQRASHSLFPSHKLKQSADSSSSRSSSSSSSSSRSRSHSPDSSGSRSYSPPRS
KQREVSQARVHANPHARPKTGSRSTSESRSRSRSRSRSASNSSRKSLSPGVSRDSSTSYT
ETKDPISGQEVAGPPLAQLQILEPQERTPASSSSIQERHLNQPEPAEKHVTQRVQPERGS
PKKCEAEEAEPPAATQPQTSEIQTSHLPESERIRHVVEEKEEVTMDTSESRPENEVPEPP
MPNADQVSNDDRPEGSAEDEEKKESSLPKSFKRKISVVSATKGVPAGNSDTEGGQPGRKR
RWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAIVDLHADDSRISEDETERNGDDG
THDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPAVPPQVSVEVALPPPVEHEVK
KVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLGQLK
ELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYAEQ
DELDYHRGLLVDRPSETKTEEQGVPRPLHPPPPPPVQPPQHPRTEQREQERAVREQWAER
EREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPAK
LLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAER
ERNRQLEREKRREHSRERDRERERDRERDRGDRERDRDRDRERGRERDRRDTKRHSRSRS
RSTPVRDRGGRR
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgcggccacggaaacacccgaacaatttcggaggaaccncgggagttctgagtggtaat
cgaggagtaggctatagcagtgggcggggtcagctcagtacgttcnaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctggccaagagcgggcagaagagcaccctggtcaag
cggctcaaaggggctctaatgcttgaaaatttacagaaacactcaacaccccatgctgca
ttccagccaaattcccagattggtgaggaaatgagcaacaacagtttcataaagcagtat
ctggaaaagcaacaggagttacttaggcagcgtctggaacgtgaagctcgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagtagcctggagagaccagagctggagctcagcaga
cattcacccagaaaagggtcctctgtttctgaagaaaaaggtgaatctgatgatgaaaaa
ccaaggaaaggagaaagacgatcatccagggtcagacaggcaagagcagctaagctctct
gagtacagccaagctgctgaagaagaagaggatcaagaaacaccttccagaaatctgaga
gttagagcagatagaaatttgaaaacagaggaggaagaggaagaagaagaggaagaggag
gaagaagaggaagaagatgagggacaaaaatctggggaggccccaattctaaggcagttt
gaagaaggggaagagatgtccagagcaaaaccagaggaggtgatggatgagagacccaaa
accataagatcccaggaccaagagaggttagagagaggagggcgagtcacaagatcccag
gaggaggccagaagaggtcaactggccagacagcagcaagagaaagatatacagacagtt
tctccccttgaggaggaagaaagagaaataaaatcttcacaaggcttagtgaaaaaatca
cagtccccttcccctcctcgactgactgaagatctaggaaaggcttctcttgtgctacaa
ccagagcaagctgccagtgaagaggagactcccccaccattgcttaccaaggaagcatct
tctccaccacctcatacacagctacagagtgaggaagaaatagagcccatggaaggccct
gctcctcctgtcctcattcagttatctcctcctagtgctgatgctgagaccagggagcac
actctgcaggtggtaggaggcctgtctcctttgtcaagtcctacagacaccaaagcagaa
tctccagcagagaaagtgtcagaggagagtgtcctgcccctagttcagaaaagcacattg
gctgaatactcaaccccaaaaggtcatgaagctgagtcacaaaaatctgctcaaccattc
tctctaaaaatggaagaactaacaccagccaaagagatcactgatgaatctctgaaacag
cagtgtttggaacagacagaaggccaaagggcttctcattctcttttcccaagccacaaa
ttaaaacagtcagctgactcatcctcaagccggtcctcttcgtcttcatcctccagttct
agatccagatctcactctcctgacagttcaggctctcggtcttactcacctccaaggtcc
aagcagagagaggtatcccaggcacgtgttcacgccaaccctcatgctagacccaagaca
ggctccaggtcaacatcagagtccaggtcacgttcccgatcccgttcccgttctgcatct
aacagtagcaggaaatctctgagccctggagtctccagggacagcagcacaagctacact
gaaaccaaagatcccatttctggtcaagaggttgcaggtccaccattggcacagctacag
atccttgagccacaggagaggacaccagcctcctcatcctctatccaagagaggcatctg
aaccagcctgagccagctgaaaagcatgtgacccagagggtacagcctgagcgggggagc
ccaaagaagtgtgaagctgaagaggcagagccaccagctgccacacagcctcaaacctca
gagattcagacttctcatctaccagagtcagaaaggattcgtcacgttgttgaggagaag
gaggaagtgaccatggacacaagtgaaagcagacctgaaaatgaggttccggaacctcct
atgcctaatgccgaccaagtcagcaatgatgaccgcccagagggcagtgctgaagatgag
gagaagaaagagagctcgctgcccaaatcattcaagaggaagatctccgttgtctcagct
accaagggggtgccagctggaaacagtgacacagaggggggccagcctggtcggaagcga
cgttggggagccagcacagccaccacacagaagaaaccctccatcagcatcaccactgaa
tcactcaagagcctcatccccgacatcaaacccctggcggggcaggaggctattgtggat
cttcatgctgatgactcccgcatctctgaggacgagacagagcgtaatggtgatgatggg
acccatgacaaggggctgaaaatatgccggacagtcactcaggtagtacctgcagagggc
caggagaatgggcagagggaggaagaggaagaggagaaagagcctgaagcagaacctgct
gtacctccccaggtgtcagtagaggtagccttgcccccacccgtggaacacgaagtaaag
aaagtgacattaggagataccttaacccgtcggtccattagccagcagaagtcgggagtt
tccattacaattgatgacccagtccgtactgcccaggtgccctccccaccccggggcaag
atcagtaacattgttcatatctccaatttggttcgtcccttcactttgggccaactgaag
gagttgctaggtcgtacaggaaccttggtggaagaggccttctggattgacaagatcaaa
tctcattgctttgtaacgtactcaacagtagaggaagctgttgccacccgcacagctcta
catggggtcaaatggccccagtccaatcctaaattcctttgtgctgactatgctgagcaa
gatgagctggactatcaccggggcctcttggtggaccgcccctctgaaactaagacggag
gagcaaggggtacctcggcccctgcaccccccacccccacccccagtccagccaccacag
caccctcggacagagcagcgggagcaggagagggcagtgcgggagcagtgggcagagcgg
gaacgggaaatggagcggcgggaacgaacacgatcagagcgtgaatgggatcgggacaaa
gttcgagaggggccacgttcccgctcaaggtcccgtgaccgccgccgcaaagaacgtgcg
aagtctaaagaaaagaagagtgagaagaaagaaaaagcccaagaggagccacctgccaag
ctgctggacgaccttttccgaaagacaaaggcagctccttgcatctattggctcccactg
accgacagccaaattgttcagaaggaggcagagcgggctgaacgggccaaggagcgggag
aagcgacgaaaggaacaagaggaagaagagcagaaggagcgggaaaaggaagccgagcgg
gaacggaaccgacagttggagagggagaaacgtcgggagcacagccgagagagggacagg
gagagagagagggacagggagcgagacaggggggaccgagagagggacagggacagggac
cgggaacgaggcagggagagggaccgcagagacaccaagcgccacagcagaagccggagt
cggagcacacctgtgcgggaccggggtggccgccgctag
DBGET
integrated database retrieval system
