Heterocephalus glaber (naked mole-rat): 101726476
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Entry
101726476 CDS
T02812
Symbol
Ddx23
Name
(RefSeq) DEAD-box helicase 23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101726476 (Ddx23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hgl03041
]
101726476 (Ddx23)
Enzymes [BR:
hgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101726476 (Ddx23)
Spliceosome [BR:
hgl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101726476 (Ddx23)
Complex C
U5 SnRNP specific factors
101726476 (Ddx23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
101726476
NCBI-ProteinID:
XP_004863124
UniProt:
G5AU41
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All DBs
Position
Un
AA seq
819 aa
AA seq
DB search
MAGELADKKDRDSSPSKEERKRSRTPDRERDRDRDRKSPPCKDRKRHRSRDRRRGGSRSR
SRSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRK
DRDSKKDEDDEHDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEV
EERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEK
DKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGR
GFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKK
LDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQA
IPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELA
QQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLS
RCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQ
TVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQ
GFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVAT
DVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQ
AILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagagctggctgacaaaaaggaccgagactcatcaccttccaaggaggaaagg
aagcgatcacgaactcctgacagagagcgggacagagaccgggaccggaagtctccccca
tgtaaagatcggaaacggcatcggtcgagggataggcggcggggaggtagccgctctcgc
tctcgttcccgttccaagtctgcagaaagagaacgacggcacaaagaacgagaacgagat
aaggaacgagatcggaataagaaggaccgagatcgagacaaggatgggcaccgtcgggac
aaggaccgtaaacgatccagcctatctcctggccgaggaaaagattttaaatctcgaaag
gacagagactctaagaaggatgaagatgatgaacatgataagaagccaaaggcccagcca
ctgtccctggaggaacttctggccaagaaaaaggctgaggaagaagctgaggctaagccc
aagttcctctccaaagcagaacgggaggctgaagctttgaagcggcggcagcaggaggtg
gaagaacggcagaagatgcttgaggaggaaaggaagaaaaggaaacagttccaagacttg
ggcaggaagatgctggaagatcctcaagaacgtgaacgtcgggaacgcagggagaggatg
gagcgagagactaatggaaatgaggatgaggaagggcggcagaagatccgggaagagaag
gataagagcaaggaacttcatgctattaaggagcgttacctgggaggtatcaaaaagcgg
cgccgaacgaggcatctcaatgaccgaaagtttgtctttgagtgggatgcatcagaagac
acatccatcgactacaaccctttgtacaaagaacggcatcaggtgcagttgttggggcga
ggcttcattgcaggcattgacctaaagcagcagaaacgagagcagtcacgtttctatgga
gacctaatggagaagaggagaactttggaagaaaaggagcaggaggaggcaagacttcgc
aaacttcgtaagaaggaagccaaacagcgctgggatgatcgtcattggtcccagaagaag
ttagatgagatgacagacagggactggcggatctttcgtgaggactatagtatcaccacc
aaaggtggcaagatccccaatcctatccggtcctggaaagactcttctctacctccacac
atcttggaggtcattgataagtgtggctacaaggagccaacacctatccagcgtcaggca
attcccattggactacagaatcgtgacatcattggtgtggctgagactggcagtggcaag
acagcagccttccttatcccattactggtgtggatcactacgctccccaaaattgacagg
attgaagagtcagaccagggcccttatgctatcatcctggctcctacccgtgagttggct
cagcagatcgaggaagagaccatcaagtttgggaagccactaggcatccgcactgtggct
gtcattggtggcatctccagagaagaccaggggttcaggctgcgcatgggttgtgagatt
gtgattgctaccccggggcgtctgattgatgtgctggaaaaccgctacttggtgctgagc
cgctgtacctatgtggttctggatgaggcggataggatgattgatatgggctttgagcca
gacgtccagaagatcctagagcacatgcctgtcagcaaccagaagccagacacagatgaa
gctgaggaccctgaaaagatgttggctaactttgagtcaggaaaacacaagtaccgtcaa
acagtcatgttcacggccaccatgcccccagcggtggaacgcctggccaggagctatctt
cggcgacctgctgtggtatacattggctctgcaggcaagcctcatgagcgtgtggagcag
aaggtcttcctcatgtcagagtcagagaagaggaaaaagctgctggcaatcttggaacaa
gggtttgatccacccatcatcatttttgtcaaccagaagaagggttgtgacgtgttggct
aaatccctggagaagatggggtacaacgcttgtacactgcatggtggaaaaggccaggaa
cagcgagagtttgccctgtccaacctcaaggctggtgccaaggatattttggtggctaca
gatgtagctggtcgtggtatcgacatccaggatgtgtctatggttgtcaactatgatatg
gccaaaaatattgaagattatatccaccgcatcggccgcacaggacgagcaggcaagagt
ggtgtggcaatcaccttcctcaccaaagaggactctgctgtgttctatgagctgaagcaa
gccatcctggagagcccagtatcttcctgtcccccagagctagccaaccacccagatgcc
cagcacaagccaggcaccatcctcaccaagaagcgtcgggaggagaccatcttcgcgtga
DBGET
integrated database retrieval system