KEGG   Heterocephalus glaber (naked mole-rat): 101726476
Entry
101726476         CDS       T02812                                 
Symbol
Ddx23
Name
(RefSeq) DEAD-box helicase 23
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101726476 (Ddx23)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hgl03041]
    101726476 (Ddx23)
Enzymes [BR:hgl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101726476 (Ddx23)
Spliceosome [BR:hgl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    101726476 (Ddx23)
 Complex C
   U5 SnRNP specific factors
    101726476 (Ddx23)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19
Other DBs
NCBI-GeneID: 101726476
NCBI-ProteinID: XP_004863124
UniProt: G5AU41
LinkDB
Position
Un
AA seq 819 aa
MAGELADKKDRDSSPSKEERKRSRTPDRERDRDRDRKSPPCKDRKRHRSRDRRRGGSRSR
SRSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRK
DRDSKKDEDDEHDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEV
EERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEK
DKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGR
GFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKK
LDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQA
IPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELA
QQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLS
RCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQ
TVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQ
GFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVAT
DVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQ
AILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq 2460 nt   +upstreamnt  +downstreamnt
atggcaggagagctggctgacaaaaaggaccgagactcatcaccttccaaggaggaaagg
aagcgatcacgaactcctgacagagagcgggacagagaccgggaccggaagtctccccca
tgtaaagatcggaaacggcatcggtcgagggataggcggcggggaggtagccgctctcgc
tctcgttcccgttccaagtctgcagaaagagaacgacggcacaaagaacgagaacgagat
aaggaacgagatcggaataagaaggaccgagatcgagacaaggatgggcaccgtcgggac
aaggaccgtaaacgatccagcctatctcctggccgaggaaaagattttaaatctcgaaag
gacagagactctaagaaggatgaagatgatgaacatgataagaagccaaaggcccagcca
ctgtccctggaggaacttctggccaagaaaaaggctgaggaagaagctgaggctaagccc
aagttcctctccaaagcagaacgggaggctgaagctttgaagcggcggcagcaggaggtg
gaagaacggcagaagatgcttgaggaggaaaggaagaaaaggaaacagttccaagacttg
ggcaggaagatgctggaagatcctcaagaacgtgaacgtcgggaacgcagggagaggatg
gagcgagagactaatggaaatgaggatgaggaagggcggcagaagatccgggaagagaag
gataagagcaaggaacttcatgctattaaggagcgttacctgggaggtatcaaaaagcgg
cgccgaacgaggcatctcaatgaccgaaagtttgtctttgagtgggatgcatcagaagac
acatccatcgactacaaccctttgtacaaagaacggcatcaggtgcagttgttggggcga
ggcttcattgcaggcattgacctaaagcagcagaaacgagagcagtcacgtttctatgga
gacctaatggagaagaggagaactttggaagaaaaggagcaggaggaggcaagacttcgc
aaacttcgtaagaaggaagccaaacagcgctgggatgatcgtcattggtcccagaagaag
ttagatgagatgacagacagggactggcggatctttcgtgaggactatagtatcaccacc
aaaggtggcaagatccccaatcctatccggtcctggaaagactcttctctacctccacac
atcttggaggtcattgataagtgtggctacaaggagccaacacctatccagcgtcaggca
attcccattggactacagaatcgtgacatcattggtgtggctgagactggcagtggcaag
acagcagccttccttatcccattactggtgtggatcactacgctccccaaaattgacagg
attgaagagtcagaccagggcccttatgctatcatcctggctcctacccgtgagttggct
cagcagatcgaggaagagaccatcaagtttgggaagccactaggcatccgcactgtggct
gtcattggtggcatctccagagaagaccaggggttcaggctgcgcatgggttgtgagatt
gtgattgctaccccggggcgtctgattgatgtgctggaaaaccgctacttggtgctgagc
cgctgtacctatgtggttctggatgaggcggataggatgattgatatgggctttgagcca
gacgtccagaagatcctagagcacatgcctgtcagcaaccagaagccagacacagatgaa
gctgaggaccctgaaaagatgttggctaactttgagtcaggaaaacacaagtaccgtcaa
acagtcatgttcacggccaccatgcccccagcggtggaacgcctggccaggagctatctt
cggcgacctgctgtggtatacattggctctgcaggcaagcctcatgagcgtgtggagcag
aaggtcttcctcatgtcagagtcagagaagaggaaaaagctgctggcaatcttggaacaa
gggtttgatccacccatcatcatttttgtcaaccagaagaagggttgtgacgtgttggct
aaatccctggagaagatggggtacaacgcttgtacactgcatggtggaaaaggccaggaa
cagcgagagtttgccctgtccaacctcaaggctggtgccaaggatattttggtggctaca
gatgtagctggtcgtggtatcgacatccaggatgtgtctatggttgtcaactatgatatg
gccaaaaatattgaagattatatccaccgcatcggccgcacaggacgagcaggcaagagt
ggtgtggcaatcaccttcctcaccaaagaggactctgctgtgttctatgagctgaagcaa
gccatcctggagagcccagtatcttcctgtcccccagagctagccaaccacccagatgcc
cagcacaagccaggcaccatcctcaccaagaagcgtcgggaggagaccatcttcgcgtga

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