Halobacillus halophilus: HBHAL_1921
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Entry
HBHAL_1921 CDS
T02031
Symbol
pcrA2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hhd
Halobacillus halophilus
Pathway
hhd03420
Nucleotide excision repair
hhd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HBHAL_1921 (pcrA2)
03430 Mismatch repair
HBHAL_1921 (pcrA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhd03400
]
HBHAL_1921 (pcrA2)
Enzymes [BR:
hhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HBHAL_1921 (pcrA2)
DNA repair and recombination proteins [BR:
hhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HBHAL_1921 (pcrA2)
MMR (mismatch excision repair)
Other MMR factors
HBHAL_1921 (pcrA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
AAA_22
MSSS
Motif
Other DBs
NCBI-ProteinID:
CCG44283
UniProt:
I0JJG5
LinkDB
All DBs
Position
929100..931262
Genome browser
AA seq
720 aa
AA seq
DB search
MEELLAELNESQQEAVVSTEGFIRVIAGAGSGKTRALTHRYALIVNELGVDPSNILSVTF
TNKAAHEMRRRVKKLIGGEQDTGFITTYHGFCVRVLREDIHRLFYPKNFIILDVEDQKIL
LREIFEDMDLKMNDKTFKRLLDKIGILKANTHYVQQMILRGEMPSVEAAGDMDGQIIQRY
LKKQKRVYGLDFDDLLNFVFVLFDQYQEVLEKWQDRLFYIQVDEFQDSSLKQFELVKKLS
ANHGNLFAVGDPDQTIYEWRGADPKYMVDFEKYFPDTQTIFLKQNYRSTPEILSLGNALI
QNNYFRVDKDMETSNPSGVKVVHYHGKNEVDEAKWVVNRIKEIVEARQANYSDIAILYRA
NYLSRSIEQELISANIEYTIFGGFKFFDRLEIKDALAHLRMTAAADDLSFSRIVNVPKRQ
IGKKRMQFLRERAEAENLSLYETLKKYKDHERFKSTGAHSFIEAIEYLKNRKDELKVSEL
LQEALQKTGYEAYRREDGDQERLDNLTELLHSIFQYEQTLGEDINLEEYLQMISLYTDNE
RDDQLDSVKLMTIHTAKGLEFPYVFVVGMTESVLPNVRALRERKERALEEERRLAYVAVT
RAERELYLTESEGFQNGGQKKYPSRFIFEVEDDLYERIGELDEALIEEAKEYIRATHHSK
EKAPAVFFEKGARVKHPVFGEGEIVDIDEKKNTYRVFFDNLKAPRPISRNFKKLEKLEES
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttcttgcagaattaaatgaatcccaacaggaagctgtcgtttccactgaa
ggatttatccgggtcattgccggagcaggctcaggaaaaacgcgtgccctgacccatcgt
tacgcacttattgtaaatgaactcggggtagatccttccaatatactttcggtcacattc
acaaataaggctgctcatgaaatgaggcgacgtgtgaagaagctgatcggcggggagcag
gatactgggtttattaccacatatcacggattttgtgttcgtgtacttcgagaggatatc
caccgattgttttatcctaagaattttatcattttagatgtggaagaccagaaaattctg
ctgagagaaatttttgaagatatggatttaaaaatgaacgataaaacctttaagcggctg
ctagataagataggaattctcaaggcaaacactcattacgttcagcaaatgattttgcga
ggggagatgccttctgtggaagcggctggagatatggacggtcaaattatccagcgctat
ttaaagaaacaaaagcgtgtgtatggccttgattttgatgatcttcttaattttgtgttt
gtcctttttgaccagtatcaggaagtactggagaaatggcaggatcgtcttttctatatt
caagtggatgagtttcaggacagcagcctgaagcaatttgagttagtgaaaaagctttcg
gccaatcatggaaacctctttgcagtgggggatcctgatcagaccatctatgagtggagg
ggggctgatcctaagtacatggttgattttgaaaagtattttcctgacacacagacgatc
tttttaaagcagaattaccgttctaccccggagattctttcccttggaaatgcccttatc
cagaataactatttccgtgtggataaggatatggaaactagcaatccatctggtgtgaaa
gtcgttcattatcacggaaagaatgaagtggatgaggcgaagtgggtggtgaaccggatc
aaggagattgtggaagcccggcaggcaaactatagtgacattgcgatactataccgggcg
aactatctgtcgcgttccattgaacaggaacttatcagtgctaacattgagtacacaatt
tttgggggctttaaattctttgatcgactggaaataaaagatgccctggctcacttacgt
atgactgctgcggcagatgacctgtcattttccagaattgtaaatgttcccaagcggcag
attggtaaaaagcgaatgcagtttcttcgtgaacgagctgaagcagagaatctatctttg
tatgaaactttaaaaaaatataaagatcacgaacggttcaaatcaacaggtgctcattca
tttatcgaagctattgaatatttaaagaatcgaaaagatgagttgaaagtttctgaatta
cttcaggaagcactgcagaaaacaggttacgaagcgtaccggcgggaagatggagaccag
gagcgcctggataacctgactgaattacttcattctatctttcaatatgagcagacacta
ggggaagatattaatctggaagaatatcttcagatgatttcgttgtacaccgataatgaa
cgtgacgatcaactagattctgttaagctgatgaccattcatacggctaaagggcttgag
tttccttatgtatttgtagtagggatgacagaaagcgtgctgccaaatgtgcgtgcgctc
agagaaagaaaagagcgggcgcttgaagaggagcggcggctggcttatgtggcggtgacc
cgtgctgaacgagagctttacttaactgaatctgaagggtttcaaaatggtggccagaag
aaatatccgtcccgtttcatttttgaagtggaagatgatctctatgaaagaatcggagaa
ttagatgaagccctcattgaagaagcgaaagaatatatacgagcgacccatcacagtaag
gaaaaggctcctgcagtcttttttgaaaagggcgcccgggtgaaacaccctgtattcgga
gaaggtgagattgtggatatagatgaaaagaaaaatacttaccgagtgttctttgataat
ctgaaagcaccgagaccgatcagcaggaatttcaagaaactcgagaaactagaagaatcc
taa
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