Halobacillus halophilus: HBHAL_3633
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Entry
HBHAL_3633 CDS
T02031
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hhd
Halobacillus halophilus
Pathway
hhd03410
Base excision repair
hhd03430
Mismatch repair
hhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HBHAL_3633 (recJ)
03430 Mismatch repair
HBHAL_3633 (recJ)
03440 Homologous recombination
HBHAL_3633 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhd03400
]
HBHAL_3633 (recJ)
DNA repair and recombination proteins [BR:
hhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HBHAL_3633 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HBHAL_3633 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HBHAL_3633 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Hpt
Motif
Other DBs
NCBI-ProteinID:
CCG45978
UniProt:
I0JPA8
LinkDB
All DBs
Position
complement(2592365..2594692)
Genome browser
AA seq
775 aa
AA seq
DB search
MIQSKMKWQFTYNENVEGFEVQQGLTSLTQQMLEKRGIVEPDAVEQFLNPSIDYLHDPFL
MEGMEKAVERVKTAIHREESILVFGDYDADGVSSTTLMMEALREAGAYCDFYIPNRFTEG
YGPNEEAFLFAKDSGYSVIITVDTGIAAIHEAEVAKQLGIDLIITDHHEVQEVLPDAYSI
IHPKTSSRYPFQELAGVGVAFKFAEALLGRFPKDYLDLVVIGTIADLVPLQGENRVLASM
GLAAISRSKRPGVMALREVCGIEGEMNEETIGFTIGPRMNAVGRLQDATPAVELLLSKDR
EEAQQIASFINQINQERQKIVAEIAKEAEELLSSRSENLENVIVVAKEGWNPGVLGIVAS
KLVRQFDRPAIVLGIDPEKGEAKGSARSIDAFDLFANCMEVRDRFLHFGGHAQAAGMTLE
VEKIDELRTALNDLAEQKLTEDDYQQVLDIEATLELGDISIKQIEEIDQLRPFGMGNPKP
LFHLMNTPKELRLIGSKKNHLKLQFQKEQSRVDGIAFGMGDVYPHLTPSDPLEVVGELGI
NEWNGRKNLQIMVKDLRVNDWQLFDLRGSKHVEKKLVVPANEYYAAVSFQGELNAPHNIP
VYTPEGFTEGDMVDGLLLLDLPERISQLEELLSRVSVSKVFACYRLEESTFLKTWPTRDH
FKWFYGMLLKRKEFNLRQEGEQLAKRKGWDHSMVEFISKVFFELEFVRIKDGIVTINSKP
SQKDLKESTLYKEREERIYMEQTLYYSTYKELKEWFNNYLNQSSKHSKEEVVNGL
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaagtaagatgaaatggcagtttacatataatgagaatgtcgaaggattcgag
gttcagcagggactaacttcgctaacccagcaaatgcttgagaagcgcggaattgttgag
ccagacgctgtggaacagtttttgaacccctctattgattatttacatgatccatttcta
atggaaggaatggagaaggcagtagagagagttaaaaccgcaattcatcgggaagaatcc
attcttgtctttggagactatgatgcggacggtgtaagttcaacaactttaatgatggaa
gccttaagagaagctggagcgtattgtgacttctatataccgaaccgctttacagaggga
tatggaccaaatgaagaagcgttcttattcgcaaaggattctggatattccgttatcatt
acagtagataccggaattgcagccatccatgaagctgaagtagctaaacagctaggaata
gatctgattataactgatcaccatgaagttcaagaagtattaccagatgcctatagcatt
attcacccaaaaacgtccagccggtacccatttcaagaattggcgggcgtaggtgttgct
tttaaatttgcggaagctttacttggaagattccctaaggattatctggatctggtcgtc
attggaaccattgctgacctggttccgcttcagggagagaaccgagtacttgcttcaatg
ggacttgcagctatttcgcgctcaaagcgcccgggggtaatggctttgcgtgaagtttgc
ggcatcgagggtgagatgaatgaagaaacgattggatttaccatcggccctcgtatgaat
gctgtaggacgcttgcaagatgctacgccggcagtagaattgcttctatctaaagacagg
gaggaagctcagcagattgcttcatttattaatcagattaaccaggaacgccagaaaata
gtggctgagattgccaaagaggctgaagaactgctatcttcaaggtctgaaaatcttgaa
aacgtaattgtggttgctaaggaaggttggaacccgggagtcttagggattgttgcatct
aaacttgtacgtcaattcgaccgacctgctattgttctgggaattgaccctgaaaaggga
gaagcaaaagggtctgctcgaagtatcgatgcgtttgatctctttgctaattgtatggag
gtcagggaccgttttcttcatttcggaggtcatgcccaagcggcaggaatgactttagaa
gtagagaaaattgacgaactaagaacagcattgaacgatctcgcagagcaaaaattaacg
gaggatgactaccagcaagtattggatattgaagccactcttgaactgggggacatctct
ataaaacaaattgaagaaatcgatcagctccggccttttgggatgggaaatcctaaaccg
ctatttcatttaatgaatactcctaaagagctcaggctaatcggaagtaaaaaaaatcat
ttgaaattgcaatttcaaaaagaacagtcacgagtggatggtattgccttcggtatggga
gatgtttatccgcacctgactccttcagaccctttagaggtagtcggagaattgggaatt
aacgaatggaatggtcgaaaaaatcttcagattatggtgaaagatttacgtgtgaatgac
tggcagttatttgatctgaggggatcaaagcatgtggagaaaaaacttgtagtacctgca
aatgagtattatgcagcggtatcatttcagggagaattgaatgcacctcacaatattcct
gtgtacaccccggaagggtttacagagggcgacatggttgatggactattgttattagat
ttacctgagcggataagtcaattagaggaacttctcagtcgtgtttctgtaagtaaagtt
tttgcctgttaccgtctggaagaaagcacctttttaaaaacctggccgacccgtgatcat
ttcaaatggttttatggtatgctgttgaagcgtaaggaattcaatcttagacaggaaggt
gaacagctggctaagagaaaaggctgggatcactctatggttgaatttatttcgaaggtg
ttttttgaacttgaatttgttagaataaaagatggaattgtaacgataaattcaaaacct
tcgcagaaagatttaaaagaatctaccttatataaagagcgtgaagagcgtatatacatg
gaacaaaccttgtattattccacttacaaggagttaaaagaatggttcaataattatttg
aaccagagttccaagcattccaaggaggaagtagttaatggattataa
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