Halomonas hydrothermalis: CLM76_03570
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Entry
CLM76_03570 CDS
T05117
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
hhh
Halomonas hydrothermalis
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
AAA_5
AAA_2
AAA_16
HTH_8
AAA
Mg_chelatase
HTH_AsnC-type
HTH_24
HTH_11
DUF603
AAA_22
MFD_D3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ATH76735
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Position
780337..781722
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AA seq
461 aa
AA seq
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MPRILIVEDEAIIRSALKRLLERHDYRVSEAASVEEARELPPSDFDLVISDLRLPGEPGT
ALIALAAPAPVLIMTSYASMRSAVDALKQGAVDYVAKPFDHTELLETVERILHKQSMQQG
TPPDITDDGGGRQTMIGDCSAMQQVYTRIRKTAPADVTVLIQGESGTGKELVARAIHQQS
KRAKAPLICVNCAAIPETLIESELFGHEKGAFTGASAARTGLVEAADGGTLFLDEIGELP
LDAQARLLRVLQEGEIRKIGSVETRHVDVRLIAATHRDLRALSKSGEFRLDLYYRLNVMQ
IALPPLREREDDVLKIADILLEKACKRHERPGLRLSRAARQDLRDYPWPGNVRELENALE
RGVILAEGHLIHPDDLGLGPVTNRPAPPPTANVTPTAPASDGEPEPNEDDLSLEDYFQHF
VLEHQDQMSETELAQKLGISRKNLWERRQRLGIPRKKTTRR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgccccggatactgattgttgaagatgaagcgattattcgcagcgccctcaagcgcctg
ctggagcggcatgactatcgcgtcagcgaggccgccagcgtcgaggaagcccgcgagctc
ccccccagcgacttcgatctggtaatcagcgatctgcgcctgccaggggaaccgggcacg
gcgctgatcgccctggccgccccggccccggtgctcatcatgaccagctatgccagcatg
cgctcggcggtggatgccttgaagcagggcgccgtggattacgtggccaagccctttgac
cataccgaactgctggaaaccgtcgagcgcattctgcacaagcaatccatgcagcaaggt
actcccccggacattaccgacgatggcggtggcaggcagacgatgattggtgattgcagc
gccatgcagcaggtctatacgcgcattcgcaaaacggcgcccgccgatgtcaccgtgctg
atccagggcgagtccggcaccggcaaggagctggtcgcccgcgccattcatcaacaaagc
aagcgtgccaaggcaccgttgatctgcgtgaactgcgcggcgatccccgaaactctgatc
gagtccgagctgtttggccatgaaaagggagcctttaccggcgccagcgccgcccgcacc
gggttggtggaagccgcggacggcgggacgctgtttctggatgaaattggtgaactgccg
ctggacgcccaggccaggctcttgcgggtgctgcaagagggcgaaatccgcaagattggc
tcggtcgaaacacgccacgtggatgtgcgcctgattgccgccacccaccgggacctgcgc
gccctctccaagagcggcgaattccggctcgacctctactaccgcctgaacgtcatgcag
atcgcgctgccgccgctgcgggagcgcgaggatgacgtgctgaagattgccgacattctg
ctggagaaagcttgcaagcgacatgagcggccggggctgcggctttcacgggcggcacgc
caggacctgcgcgactacccatggcccggtaacgtccgcgagctggaaaatgccctggag
cgcggtgtcattctggccgaggggcatctgatccaccctgacgacctgggccttggtcca
gtgaccaatcgcccggcgccgccccccaccgccaacgtcacacccacggctcctgccagc
gacggcgaaccggaacccaacgaggacgacctctctctggaggactattttcagcacttc
gtgctggagcatcaggaccagatgagcgaaacggagctggcacagaagctgggcatcagc
cgcaagaacctctgggaaaggcgtcaacggctagggattccccgtaaaaaaacgacacgc
cgataa
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