Hippoglossus hippoglossus (Atlantic halibut): 117752728
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Entry
117752728 CDS
T07778
Symbol
cacna1ab
Name
(RefSeq) calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117752728 (cacna1ab)
04020 Calcium signaling pathway
117752728 (cacna1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117752728 (cacna1ab)
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117752728 (cacna1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
117752728
NCBI-ProteinID:
XP_034426254
LinkDB
All DBs
Position
1:complement(27545766..27685616)
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AA seq
2571 aa
AA seq
DB search
MLSPLCQDHGGSWPQTSSCSSSSQGLHRPLRCHPPPISGSSVGPNPTYYHAVYDVRVEQY
REVPFISGVHSRRSSMPLVTHHGDPAAPPIRRRGGVVDHRDVILAHQAHKMHNTPQARRK
QWEMARFGDEVPNRYGGGGGGGGGGGGGGGAGGQGGPGRGGSRQGGPPGAPRMYKQSMAQ
RARTMALYNPIPVRQSCLTVNRSLFLFSEDNLVRKYAKKITEWPPFEWMILTTIIANCIV
LALEQHLPDGDKTPLSERLEETEPYFIAIFCFESGIKILALGFALHKGSYLRNGWNVMDF
VVVLTGILSSVGSQLDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLF
VAILMFAIIGLEFYMGKFHKTCYDEFTGEVVDELPCGTELPSRLCPNGTVCKGGWIGPNY
GITQFDNILFAVLTVFQCITMEGWTDMLYYSNDVEGSAWNWMYYIPLIIIGSFFMLNLVL
GVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDTTGNFDGT
RRRPTIKTKNNKTELLNPEEGEDNMGDAVGFARSSIKSSKDGSNYNKKERRLRFFIRKIV
KTQAFYWTVLCLVGLNTMCVAAVHYNQPELLSDFLFYAEFIFLGLFMSEMLIKMYGLGIQ
PYFHSSFNCFDCVVIVGSIFEVVWATIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLV
VSLLNSMKSIVSLLFLLFLFIVVFALLGMQLFGGQFNFEIGTPPTNFDTFAAAIMTVFQI
LTGEDWNMVMYDGIESQGGVNDKGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQEL
TKDEEEQEEAANQKTAMQKAKEVAEVSPLSAANLSIAAKEQQKNCIKGNKSVWEQRTSEI
RRQNLMTSREALYNELEQEDWKVEGEGEEQHPLTPPTQVSYPRKPRGDMKTHLDRPLVVN
PQDNRNNNTNKTQPGELPLEQEYRHQDIDHDRRAAHNHHHHRHHHQKAIGQDSGDTGQPT
ETRMEHGFSCTSLGNVEGGVTGQPGEERHSHRSHRGHRHRNREGREARSVSPHRSETGEG
HHEHKRSRQHRRAAREGEEGRRHRSRGTEVEGEKVEEGEGRKTRRHRHGNQERSRGHRTR
KEHHSTGPSLSTTRPIQQYNEDLDNFRNNSKLASAHEHPYALPPDHPDHPDHVNNLLNCC
DADTHTLLHSMDSLILTSMAKPDYTSIDMPPVYPYPSTNAILQVNKNANTDQKKSEEKKE
EEDEEGDGDGPKPMPPYSSCFIMSNTNPFRKCCHYILTLKYFEFSILSVIAMSSIALAAE
DPVSPDSPRNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGSYFRDLWNILDFIVVSGA
LVAFAFTPTSTRGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLN
ILIVYMLFMFIFAVVAVQLFKGRFFYCTDESKEFERDCRGEYLVYERDEVKAQKREWKKY
DFHYDNVAWALLTLFTVSTGEGWPQVLKHSVDSTYENQGPSPGYRMEMSIFYVVYFVVFP
FFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINARPLTRHMPKNKLSFQYRM
WQFVVSPPFEYSIMALIALNTIVLMMKFDGASITYDDVLQNLNMVFTTFFFMESVLKIIA
FGPLNYFRDAWNIFDFVSVLGSITDILVTKLGDNFINLSFLRLFRAARLIKLLRQGETIR
ILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNLALEHEEGESAINEHNNFRTFIM
ALMLLFRSATGEAWHEIMLACLGGKECDKASGNTEPECGSTFAYTYFVSFIFLCSFLMLN
LFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVISPPLG
LGKKCPHRVACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKHQMDAELR
KEMMAIWPNLSQKTLDLLVTPHKAATDLTVGKIYAAMMIMEYYRQSKTKKLQALREEQSS
TLQSQCMLNRTPLMFQRMEPPPEGGGTEGQGGQGVNGLPSTQPDNINSIPPEGCIPESQS
WVSDKAQEMFQKTGNWSPDRPYPDDLHDNRHNPQTVEMREMGRYHPVDGHGRTLSMPRLS
ADNQRVHAVSRRRHRPRGNNLSTITDTSPMRRSTSSLVHGRTGRGVRLDDYSLERVVSEE
GRHGGGRKHRDRSHRASQRSLTRYTDADTGLGTDLSTTTQSGDLPPKERERDRGRTKDRR
HHHHHHHHHSSMDKERYSHDRPDYPPRHPHDHHWSRSPSEGPDGRGHRQGSSSVSGSPVP
STSGTSTPRRGRRQLPQTPAVPRPHVTYSPAVRKPSYGPPGPGRLRSPSPRHFSPPDHDR
GYHHRPPSRQGSPHHGGSSSHHGSPRSPRNQSPRSPLHGSPRSPHRGRWSGPPPGDSLEG
DGPFYEHDYEYERHHEPPAYEQSLSHGNPHPHGGNPHPHPRSPRTARHGPPPAPHPHPRR
VPNGYRSSSPSPHRRGPPGAPPHPHHRPPHARGPRKGLHEPYSETDEDDWC
NT seq
7716 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcccccctttgtcaggaccatggcggctcgtggccccagacgtcgtcctgctcc
tcctcgtctcagggcctccaccgcccgctgcgctgccaccctcccccgatcagcgggagc
agcgtgggccccaaccccacctactaccatgcggtgtatgacgtccgggtggagcagtac
agagaagtgcccttcatcagtggggttcactcccgccggagctccatgcccctggttacg
caccacggcgaccccgcggcgccaccgatccggcggaggggcggagtggtggaccaccgg
gacgtcatcctggctcatcaggctcacaagatgcacaacacaccacaggccaggaggaaa
cagtgggaaatggcgcgttttggagacgaggtgcccaacaggtatggaggtggaggagga
ggaggtggtggtggcggcggtggcgggggtgccggcggacaaggggggcccggccgcggt
ggcagcaggcaaggggggccccctggagcgccgcggatgtacaagcagtcgatggcccag
agagcccggaccatggccctgtacaaccccatacccgtccggcagagctgcctcacggtc
aaccgctccctcttcctcttcagcgaagacaacctggtgaggaaatacgccaaaaagatc
accgaatggcctccgtttgaatggatgatcctcaccaccatcattgcaaactgcatcgtc
ctggctctggagcagcatcttcctgatggagacaagacgcctctgtccgaacgactggag
gagacggagccctacttcatagccatcttctgtttcgagtcggggataaagatcctggct
ctgggctttgcgttacacaaaggctcgtacctgagaaacggctggaacgtcatggacttc
gtggtcgtcctcaccggtattttgtcgtcggtggggtctcagctcgacctgaggacgcta
cgagccgtcagagtgctgcggccactgaaactggtgtctgggattcccagcctgcaggtg
gtgctcaagtccattatgaaggccatgatccccctgctgcagatcggcctgctgctgttc
gtggccatcctcatgttcgccatcatcggcctggagttctacatggggaagttccacaaa
acctgctacgatgaattcacaggcgaggtggtggatgaattgccatgtggcacagagttg
ccgtcccggttgtgtccgaacggcacggtgtgtaaaggcggctggatcggacccaactac
ggcatcacccagttcgacaacatcctgtttgccgtgctcaccgtcttccagtgcatcacc
atggagggatggacagacatgctctactacagtaatgatgtggagggcagcgcctggaac
tggatgtactacatccccctcataatcatcggctccttcttcatgctcaacctggtgctg
ggtgtactctcaggtgaatttgccaaagagagagagcgggtggagaacaggagcgagttc
ctcaagctgaggcgacagcagcagatcgagagagagctcaacggatacctggagtggatc
tgcaaagcagaggaggtgattctggccgaggacgacaccacagggaactttgatggtacg
aggcgacggccaaccatcaaaaccaaaaacaacaagacggagctgctgaaccctgaggag
ggggaggacaacatgggagacgcagtcggtttcgcccgctccagtataaagagcagcaag
gacgggtccaactacaacaagaaggagcgacgactgcgattcttcatccgcaagatagtg
aagacgcaggcgttctattggaccgtcctctgcctggtgggcctcaacaccatgtgtgtg
gctgcggtgcactacaaccagccggagctgctgtccgacttcctgttctatgcagagttt
atcttcctcggtctgttcatgtctgagatgctgatcaagatgtatggtctgggcatccag
ccctacttccactcctcattcaactgcttcgactgtgtggtaattgtgggcagcatcttt
gaggtggtgtgggccaccatcaaaccgggcacgtcctttgggatcagcgtgctacgagct
ctgcgactgctccgcatcttcaaagtcaccaagtactgggctcctcttcgaaacctggtg
gtgtcactgctgaactccatgaagtccatcgtcagtttgctcttcctcctcttcctcttc
atcgtggtctttgccttgttggggatgcagctgtttggaggacaattcaactttgaaatc
ggaactccgccaaccaactttgacacttttgctgctgcgatcatgacggtgtttcagatt
ctgacaggagaggactggaacatggtgatgtatgatggcatcgagtcgcagggaggagtg
aacgacaaagggatggttttctccatcttcttcatcgtcctcacgctctttggcaactac
acgctgctcaatgtgttcttggccatcgctgttgacaatctggccaacgcacaggagctc
acaaaggatgaggaggaacaagaggaggcagccaatcagaagacagcaatgcagaaggcc
aaagaggtggcggaagtcagcccactgtcggccgccaacctgtctattgctgctaaggag
cagcagaagaactgcatcaagggtaacaagtctgtgtgggagcagagaacaagtgagatc
cgccgacagaatctgatgacgagtcgcgaggcgctctacaacgagctggagcaggaggac
tggaaggtggaaggcgagggagaggagcagcacccactgaccccccccactcaggtgtcc
tacccacggaaaccacgtggtgacatgaagacccacttagaccggccgctggtggtcaac
ccacaggacaaccgcaacaacaacaccaacaagacccaacctggtgagctgcctctggag
caggagtaccggcaccaggacatcgaccacgaccgccgagccgcccacaaccaccaccac
caccgccatcaccatcagaaagctattgggcaagacagtggggacactgggcagccgaca
gagacccgcatggagcacgggttcagctgcacgtctctggggaacgtggagggcggtgtg
acgggccagccgggggaggagaggcatagccacaggagccaccggggccaccggcacagg
aacagggaaggcagggaggctcgcagcgtatctccccaccgtagtgagacgggagagggg
caccatgagcacaagaggtccaggcaacaccgcagggcagccagggagggggaggagggc
agaagacacagatccagggggacggaggtagagggggagaaagttgaggaaggcgaggga
cgtaagacaagacggcatcgccacggcaaccaggagaggagcagagggcatcgcaccaga
aaggagcaccacagcaccggtcccagtctctccaccactcgacccatacagcagtacaac
gaggacctggacaacttccgcaacaacagcaagctggcgagcgcccacgagcatccttac
gccctcccgccagatcaccccgaccaccctgaccacgtcaacaacctgctgaactgctgc
gacgccgacacccacaccctgctccacagcatggacagcctgatcctgaccagcatggcc
aaaccggattacacatccatagacatgcccccggtgtacccctacccctccaccaatgcc
atcctgcaagtgaacaagaacgccaacaccgaccagaagaagagcgaggagaagaaggag
gaggaggacgaggaaggagacggcgacggccccaagcccatgcctccctacagctcctgc
ttcatcatgtccaacaccaacccgtttcggaagtgctgtcactacatcctgactctgaag
tattttgagttcagcatcttgtcagtcatcgctatgagcagcatcgccctcgctgcagag
gacccagtgtcgcccgactcaccacgaaacaatgtgctgcgttattttgactacgttttc
acaggcgtcttcacgttcgaaatgttgatcaagatggtggtgctcggcctgtttctccac
cagggctcctacttccgcgacttgtggaacattctggactttatagtggttagtggtgct
ctggtggccttcgccttcacgccgaccagcacccgggggagcagcaagggcaaagacatc
agtacaatcaagtcccttcgagtgctgagggtgctgcgtcctctaaagaccatcaagcgt
ctccccaagttaaaggccgtgtttgactgtgtggtcaactccctgaagaacgtgctgaac
atcttaatcgtctacatgctcttcatgttcatcttcgctgtcgtggccgttcagctgttc
aagggtcgattcttctactgcacggacgagtccaaagagtttgagcgtgactgcaggggc
gagtacctggtgtatgaaagagacgaggttaaagctcagaagcgggagtggaagaagtac
gattttcactacgacaacgtggcttgggccctgctcaccctcttcacagtctcgactgga
gaggggtggccacaggtgttaaaacactctgtggactccacctatgagaatcagggtcct
agcccgggttacaggatggaaatgtccatcttttacgtggtgtacttcgtagtcttcccc
ttcttcttcgtcaacatcttcgtggctcttatcattatcaccttccaggaacagggggat
aagatgatggaagattacagtttagaaaagaacgagagagcctgtatagatttcgccata
aacgcaaggcctctaacgcgccacatgcccaagaacaaactgagcttccagtatcgcatg
tggcagttcgtggtgtctcctcccttcgagtacagcatcatggctctgatcgcgctcaac
accatcgtcctcatgatgaagttcgatggtgcatcaataacctacgacgacgtcctgcag
aacctcaacatggtgttcaccaccttcttcttcatggagtcggtcctcaagatcatcgct
tttggccctctgaattacttcagagacgcctggaacatttttgattttgtgtccgtcctt
ggaagcatcactgacatattagtgacaaaactaggggataatttcatcaacctgagcttc
ctgaggctgttcagggcagctcgcctcatcaagctgctgcgacagggagaaaccatccgc
atcctgctgtggacctttgtccagtccttcaaggctctgccgtatgtgtgtctgctcatc
gccatgctcttcttcatctacgccattatcggcatgcagttgtttggtaacctggcactg
gagcacgaggagggagaaagtgccatcaatgagcacaataacttcagaaccttcatcatg
gccctcatgctgctgttcaggagcgcgactggcgaggcgtggcatgagatcatgttggct
tgtctgggcggtaaagagtgcgacaaggcctcaggaaacacggagccagagtgtggcagc
accttcgcctacacctactttgtctccttcatcttcctctgctccttcctgatgctgaat
ctgtttgtggctgtgatcatggacaactttgagtacctgaccagagactcgtcgatcctg
gggccgcatcacctggacgagtacgtaaggatttgggccgagtacgaccctgccgcctgc
gggcgcatacattataaggatatgtacagtttattgagagttatctcccctcccctgggc
cttggcaagaaatgcccacatagggtggcctgcaagaggctgctgcgcatggatctgccg
gtcgcagacgacaacacggtgcattttaactccaccctcatggctctgatcaggaccgca
ctggatataaagatcgccaaggggggtgcagacaagcaccagatggatgccgagctgaga
aaggagatgatggcaatttggccgaacttatcgcagaagactctggacctgctggtgacg
ccgcacaaggcagccacagacttgacggtgggcaaaatctacgccgccatgatgatcatg
gagtactaccggcagagcaagacgaaaaagctgcaggccctgcgtgaggaacagagttcg
accctgcagtcacagtgtatgctgaaccgaacgccattaatgtttcagcgcatggagccg
ccccctgagggagggggcacggagggccagggggggcagggcgtgaacggcctccccagc
acccagcccgacaacatcaacagcatacctccggagggttgcatccccgagagccagtcg
tgggtgtcggacaaagcccaggaaatgtttcagaagacgggcaactggagcccagacagg
ccgtaccccgacgatctccacgacaaccggcacaacccgcagacggtagagatgagggag
atggggcgctatcacccagtggatgggcatgggcggaccctctccatgccccgcctctcg
gcagacaaccaaagagttcatgctgtctcgcggaggagacacaggccccgtggaaataac
ctcagtaccatcaccgacaccagcccgatgcggcgctccacctccagcctggtccacggg
cgcacgggccggggtgtgaggctggacgactactccctggagagggtggtgtccgaggag
gggaggcacggaggaggacgcaagcacagggacaggagtcatcgcgcgtcacagcgctcg
ctgaccagatacaccgacgcagacacggggctcggcacagacctcagcaccaccactcaa
tcgggtgacctgccacccaaggagcgtgaacgggaccgcggccgcaccaaggaccgccgt
caccatcatcaccaccaccaccaccacagctctatggacaaggagcgctacagccacgac
cgtcccgactaccctcccaggcatccgcacgaccaccactggtcccggtcgcccagcgag
gggcctgacgggcgaggtcacagacagggcagtagttcggtgagcggcagcccggtcccc
tccacctcggggaccagcactccacggagaggtcgtcgccagctgccccagacccctgct
gtcccccgtccacatgtcacctactcccccgctgtccgcaagcccagctacgggccccca
gggccgggccgtctgcgctcaccctcgcccagacacttctccccaccagatcacgacaga
ggctaccaccaccgacccccgtcacgccagggctctccccatcacgggggttcgtcatcg
catcacggctcgccacgctccccaaggaaccagtcccctcgctcgcccctccatggctca
cctaggtcccctcaccgaggccgctggagtgggcctccgcctggggacagcctggaggga
gacgggcccttctatgagcatgattatgagtatgagcggcaccatgagccccctgcctat
gagcaaagcctctcccatggcaacccacatccacatgggggaaatcctcacccacaccca
cgctcaccaaggactgcccgccatgggccccctccggcccctcacccgcacccacggagg
gtccccaatggctaccgttcatcctcaccttccccacatcgacggggaccacccggggca
cccccccacccgcaccaccgccccccccatgccagagggccccgcaagggcctgcatgaa
ccttacagtgagacggacgaagatgactggtgctag
DBGET
integrated database retrieval system
