Hippoglossus hippoglossus (Atlantic halibut): 117754722
Help
Entry
117754722 CDS
T07778
Name
(RefSeq) partitioning defective 3 homolog B-like isoform X1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
DNA_ligase_aden
Motif
Other DBs
NCBI-GeneID:
117754722
NCBI-ProteinID:
XP_034429755
LinkDB
All DBs
Position
21:complement(6293779..6487866)
Genome browser
AA seq
1246 aa
AA seq
DB search
MKVTVTFGQTGVVVPCKEGWTVRELIQQATQRYRKLLEQEGEFMVRTHHVEYCDGGILDP
DDILSDLVEDKDKLMAVYEEQEAQQRGVANTSLAPSPELYQTELSAFQPIAGGEIEVNSS
VLKSNTPLLVRSSSESALSPQVTETEPSHNADASEMAAGPAAEGPVGMERAQGKQAFSSS
LTRTVEILGEDSPLGIHVVPYCSSLSGRSLGLFIRGVEEESRSRKEGLFQEDECIVKISN
TSLMDKTFSQAQEVFRQAMRSQVVRLEVVPSSNRERYEKSLIGQLFGNSAGPDHSPRVTK
TKEPPPPIKAKPVFKPPENPATRLAEEAATLDSAVGSPKGRSESPLLKKSPALSSLVANK
RGGRRLRIDLKKGSEGLGFTVVTRDSSVHGPGPILVKNILTRGAAVKDGRLQSGDRILEV
NGVDITGVGQEELVCMLRGTRQGESVSLVVLRQEEMFLPREMEVSRVPGSVWESGKEQLM
FEVPLNDTGSAGLGVSLKGNKSRETGEDLGIFIKSIIHGGAAYKDGRLHINDQMVAVNGE
TLVGRSNHVAMETLRRSMSQEGNVRGTIQLVVLRTLKEQPGVSPNRSFDGSSGLSGVMRP
VNGQTGLVNHSNGPVHPPLVTNTLYGSNVTNGSYSHMDEEDEGELYGQEEFTSSTQHSYL
QEWGNSHISSQAQPQAPSQNQNQNQSQRQFQHVKASKSMDLGTTQNQQQTVADESNVGSL
VGNTAAPASPVELGPTLGLKKSSSLESLQTAMSEVNRKNELLPFHRPRPNMVRGRGCNES
FRAAIDKSYDGPPEDDDDDGSDPSSGRDTPASSSSRQGVGDQIEEKGKKDKKKKAKTKKK
EKNKGKGKEKKKAEEPEETEKKSKKIGFGLLRFGKKKEEKKEAKAALQRQKSDILSDHEF
ERMKEERERIEAGHPELREPQSRDQQGGGSTYPDVEDDEADPNYARIQNFRDREMGPVPQ
QLSQAPPYNTIQHSHAHAASPQNPSAFPGHGNHANDPGAVPDDDHIDRLYAKVNKPRAAG
SASPPAPAAVNDSSLDRIQQLRREYQQARREGMVPPYEELDQRRRGHENDAHRMPGRGAD
PRLAPRYEEVERQYASLPRRGPLDPAEYPMQPWSGHYPGPPQPPQGYPQPMSYPNPNPQP
APSYSGYPPPGQPYPRPGDPRGVDPGYYPHPSSQQRGPLRQDVPPSPTPPLRGLRYDTMM
RGTGGGGYRHLVDPGPDQYSYTGEVGRQQQQQQTNPRQKNAMTAAV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgacggtgacgttcgggcagacgggggtggtggtgccctgcaaggagggctgg
actgtgagggaactcatccagcaagccacgcagagatacagaaaactgctggaacaggaa
ggagaattcatggttcggactcaccacgttgaatactgtgatggggggattctggaccct
gatgatattctcagcgatctggtggaagacaaagacaagctgatggcggtgtatgaggaa
caggaagcccagcagaggggtgtggccaacacgagcctcgcccccagccctgagctctac
cagactgagctctcggccttccagccaatcgcaggaggagagatagaagtcaattcttca
gtgctcaagtccaacacccccctgctggtgagaagtagcagtgagtcagccctcagcccc
caggtgacagagacagaaccctcccacaatgcagacgcctctgagatggcagccggtccc
gccgcggaggggcctgtagggatggagcgagcccaaggcaaacaggccttcagtagcagc
ctcaccagaacagtggagatcctgggagaggacagtcccctgggcatccatgtggttcct
tactgctcatcactcagtggacggtctctgggtctgttcatccgtggagtggaggaggag
agccgctccagaaaggagggcttgtttcaagaggacgagtgcatcgtcaagatcagcaac
accagcctcatggacaagacatttagccaggcccaggaagtctttcgtcaggcgatgcgt
tcccaagtcgtccgcctggaagtagttccctcgtccaacagggaacgttatgaaaagagt
ctgattggtcagctgtttggaaacagcgccggtcctgatcacagccccagagttaccaag
accaaagagccgccaccgcccatcaaagccaaacctgtgtttaagccgcctgagaatcca
gccacgcgactggcagaggaagctgctactctggactctgctgtcggttcccccaaaggc
aggagcgagagcccccttcttaagaaaagccctgctctctccagcctggtggccaataag
agaggaggacgaagattgaggatcgacttaaagaaaggttccgaaggtctcggttttact
gtcgtaaccagagactcctccgttcatggtcctggtcccattctggttaagaacattttg
acacgtggagccgctgtcaaagacggacgcctgcagtctggtgaccgcatacttgaggtc
aacggtgtggatattacaggcgtgggccaggaggagttggtgtgcatgctacgcggcacg
cggcagggagagagtgtgagcctggtggtcctgcggcaggaggagatgttcctgcccaga
gagatggaggtgtcccgtgtgccaggctctgtttgggagagtggaaaggagcagctcatg
ttcgaggttcctctaaacgacaccggctcggcagggcttggcgtcagcctcaaaggaaac
aagtcccgggagacgggagaggatctgggaatcttcattaaatccattatacacggaggg
gctgcatacaaggatggccgtctgcatatcaatgaccagatggtagctgtgaatggagag
acgctggtgggacgctccaatcatgtggccatggagactctccgccggtcaatgtcacag
gagggaaacgtccgagggaccatccagctggtggtgctgaggactttgaaggagcaaccc
ggcgtgtcacccaatcgctcctttgacggctcctctggtctgtcgggggtgatgagacca
gtgaacggtcagacaggattggtcaatcattccaacggccccgtccacccccccctggtg
accaacactctctatgggtctaatgtgaccaatgggagttattctcacatggacgaggaa
gacgagggggaactgtacggacaggaggagttcacgagctctacacaacactcgtaccta
caggaatggggaaactctcacatctcaagccaggctcagccccaggctcccagccagaac
cagaaccagaaccagagccagcgacagttccagcatgttaaggcctccaagagcatggac
ctgggtacgactcagaaccagcagcaaactgtggcagatgagagcaacgtaggatcgctg
gtcggaaacactgcagctccggcgagtcccgtagaactgggccccaccctcggcctgaag
aaatccagttcgttggagagtctccagacggccatgtcagaggtgaacaggaaaaacgaa
ctcctcccattccaccgtcctcgcccaaacatggtcagggggagaggctgcaacgagagc
ttcagggcagctatcgataaatcctacgatgggccgcctgaagatgacgacgatgatggt
tcggacccgagctcaggccgtgacaccccagccagcagttcatctcgccagggagtgggg
gatcagatagaggagaagggcaaaaaggacaagaaaaagaaagccaagacaaagaagaaa
gagaagaacaagggaaaaggaaaagagaaaaagaaagcggaggagcccgaagagacggag
aagaagagcaagaaaataggatttggtcttctgagatttgggaagaaaaaggaggagaag
aaggaggcgaaagctgctctgcagcgacagaagtctgacatcctgagtgatcatgagttt
gagaggatgaaggaggagagagaaagaattgaggcaggtcaccctgagctgcgagagccc
cagtcgagagaccagcaaggtggcgggtccacgtatccagatgttgaggatgatgaagcg
gatcccaactacgccagaatacaaaacttcagggatcgagagatgggtccagttccgcag
caactgagtcaggcgcctccctacaatacaattcagcacagccatgctcacgctgcttcc
ccgcaaaacccctctgcctttcccggacatggaaatcatgctaacgaccccggagccgtc
cctgatgatgaccacattgacaggctgtatgccaaggtcaataaaccgagggcagctggg
tctgcctctcctcctgcgcctgccgctgtcaatgacagcagtctggacaggatccagcag
ctaagacgagagtatcagcaggcgaggagagaaggaatggtcccgccttatgaggaactg
gaccaacgacgcagagggcacgaaaacgacgcacacaggatgccaggcagaggggcagat
cctcggttggcaccacgttatgaagaggtggagcgtcagtatgcctccttaccaagacgg
ggtccgttggatccggctgaataccccatgcagccctggtcaggtcactaccccggacct
ccccagcccccacagggttaccctcagcccatgtcctaccctaaccccaacccccagcct
gctccatcttactccggctacccacctccgggccagccgtacccacgtccaggggaccca
cggggcgttgaccctggctactacccccacccaagctctcagcagagagggcccctgcgg
caggacgtgccaccgtcccccacccctccacttcgcggactacggtacgacacgatgatg
cgtggaactgggggtggaggctacaggcacctggtggatcctggtccggaccaatatagc
tatactggggaggtaggaagacagcaacagcaacagcaaaccaacccaagacagaagaat
gccatgactgcagctgtgtag
DBGET
integrated database retrieval system
