Hippoglossus hippoglossus (Atlantic halibut): 117755198
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Entry
117755198 CDS
T07778
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117755198 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Protocadherins
117755198 (si:ch211-199f5.1)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
FctA
Motif
Other DBs
NCBI-GeneID:
117755198
NCBI-ProteinID:
XP_034430670
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Position
21:14495793..14499642
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AA seq
993 aa
AA seq
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MRLPTEGKITAKMMRGRFITYWYRWIIMFSIHQFVFASVAQGDGNTIRYQTNEEDAPGTV
IGNLAKDMSLSPSHSSKTNFRMMKQFNDSFIRVRESDGQLTVVERIDRERMCRHTPQCLI
TFDVVNFSKERYKLIHVEVEVKDINDNSPEFPSRESIVDISENAAVGSRVPLDPAADADV
GSNYIQSYQISVNSHFTIDVLLRADGVKYAELVLMKELDRETQASYTVELVATDGGNPHR
SGSTKINIRVTDFNDNSPVFDQNSFSVSLPEDAPVGTVILSLNAVDADEGSNGEVVYGFG
KQVPREIRELFHVDSKSGRLTLRSPVDFEDKRTYELDVQATDLGANPTPSVCKIIIHVTD
VNDNAPEISITPMTSITTGIAHISEAAERDSLVALISTLDRDSGVNSQVHCTLFGHDHFK
LRQAYEDSYMIVTAAVLDRERISEYNLTVMAEDFGSPPLRKITQYTVRLTDVNDNAPHFA
KAVYEVSVVENNAPGAYITTVEASDADLGNNGKITYRLVDSVIMGSPVNTFVSLNSVSGS
IYALRSFNYEVMKVLDVHIQASDGGSPQLQSTAVVRLKIVDQNDNQPSIIEPPLYKGSAE
VFLPKDAPAGYVVTQIKATDADEGINAQLSYKITEGGHLGFSINKETGKVHVSRQLTYDL
TDNVKVTVAVSDNGTPALTSTAIIHLSFIEGTLPSLPSFAPNGGEELFEWDMSIAIIIVL
AGSCSLLLLAIILITTICSRRRKETRERGCDEKEDMPNVEKVESGHIDSVIANHKGKVFD
AHPFPEKPQLANSNTTDTGCEDGRQTAGIFESNSRVTEGKLKQGYSTLPGYGKETVRPIT
IWKGNSFTTISARDPHISGKDSGKGDSDFNDSDSDLSADVHKKESPPMNSLWACTSECKV
LGHSDRCWSPSATRPNTSLACAPHLSTFSKTASLPRDSRRENYYPAHVNKPTGLQSVYEK
VQHQEFDYILVGPPTPARIQEADEISIPEYANS
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcccaccgaggggaagatcaccgcgaagatgatgcgggggagatttataact
tattggtaccggtggattattatgttttccatccatcagtttgtattcgcctcggtggca
cagggcgacgggaatactatacgataccagaccaatgaggaggacgcgccgggcacggtc
attggaaacctcgccaaggacatgtccttgagtccgtctcactcctccaagaccaatttt
aggatgatgaaacaattcaacgactcgttcatcagggtgcgggaaagcgacgggcagctc
accgtcgtggagcgcatcgaccgggagaggatgtgcagacacactccacagtgcctcatc
acttttgacgtggtgaatttctccaaagagcgctacaaattgatccacgtcgaggtggag
gtgaaggacatcaacgacaactctccggagttcccgagcagggagtccatagtggatatc
tcggagaacgcagcggtggggtcccgggtccctctggacccagccgcggacgcagacgtc
gggtcaaactacatccaaagctaccagatctccgtcaacagtcacttcaccattgacgtg
ctcctgagagcggatggggttaaatatgcggaattggtgctaatgaaggagctagacagg
gagactcaggcgtcatacaccgtggagctggtggccacggacggagggaacccgcacaga
tcggggtcaacaaagatcaacatcagagtgacggactttaacgacaatagccccgttttt
gaccagaacagcttctcggtgagtttgcccgaggacgcaccggttggcacagtcatcctg
agcctgaacgcagtggacgcggacgagggttcgaacggggaggtggtgtacgggttcggg
aaacaggtcccccgcgagatccgagaacttttccacgtggatagtaaatcgggccgcctg
actctcaggagccccgtggatttcgaggacaaacgcacctacgagctggacgtgcaggcg
accgacctgggagccaacccgaccccctccgtgtgcaaaatcatcatccacgtcaccgac
gttaacgacaatgccccggagatcagcatcaccccgatgacctccatcaccacgggcatc
gcgcacatcagcgaggcggcggagagggacagcctggtggcgctgatcagcaccttggac
agggactcgggtgtgaacagccaggtccactgcaccttgttcggccacgaccacttcaag
ctgcgccaggcgtacgaggacagctacatgatagtgaccgcggccgtcctggaccgggag
aggatcagcgagtacaacctgacggtcatggccgaggactttgggtcgcccccgctgagg
aagatcacccagtacaccgtcaggctcaccgacgtgaatgacaacgcccctcactttgcg
aaggctgtgtacgaagtttccgtggtggagaacaacgccccgggcgcgtacatcaccacg
gtggaggccagcgacgcggatctgggcaacaatggcaagatcacatacaggctcgtggac
agcgtcatcatgggctccccggtgaacacctttgtgtctcttaactcggtgtctggctcc
atatacgcactgaggagttttaattacgaggtgatgaaagtgctggacgtgcacatccaa
gccagcgacggggggtcaccacagctgcagagcacagctgtcgtccggctaaagatagtt
gatcaaaatgacaaccagccctccatcatcgagcccccgctttacaaaggctctgctgag
gtgttcctgcccaaagatgcacctgcgggttatgtggtaacccagataaaggccacagat
gccgatgagggcataaacgcacagctgtcctataaaatcacagagggggggcacctgggc
ttctccatcaacaaggagacagggaaggtgcacgtgagcagacagctgacatatgatctc
acagacaatgtcaaagtcacggtggcggtcagtgacaatggaacccccgcactcacctcc
acagccattatacatttgagctttatagaagggaccctcccgagcttgccttccttcgcc
cccaatggtggcgaggagctctttgaatgggacatgtccatagccataatcattgtactg
gcagggagctgctctctcctcctgctggctatcattctcattacaaccatttgcagccgc
aggaggaaagagacgagggagagggggtgcgatgaaaaagaagacatgcccaacgtggag
aaagtggagagcgggcacatcgattcagtgattgccaaccacaaagggaaagtgtttgat
gcccatccatttccagagaagccgcagttggccaacagcaacacaacagacacaggctgc
gaagatggcaggcagacagcaggcatctttgagtcaaacagcagggtgacggagggtaaa
ttaaagcagggttattctacgttgccaggatatgggaaggaaaccgtcaggcccataacg
atatggaagggtaattccttcacaacaatctcagcaagagatcctcacatcagcggcaag
gacagtgggaaaggggacagcgacttcaacgacagcgactcggacttgagtgcggacgtg
cacaaaaaggagtcgccgccaatgaacagtctctgggcgtgcacgagcgagtgcaaagtg
ctgggacactcggaccgatgctggagcccctcggccacaaggcccaacacgagcctggcc
tgcgcgccgcacctgtccacgttctccaagacagcttcgctcccccgggacagcaggagg
gagaactactacccggctcacgtgaacaaacccaccgggctgcagagcgtgtacgaaaaa
gtccaacaccaggaatttgattacattctcgttggcccgccgaccccggccagaatacag
gaagcggacgagatatcgattccggagtatgcaaactcttaa
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