Hippoglossus hippoglossus (Atlantic halibut): 117756381
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Entry
117756381 CDS
T07778
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117756381 (lingo2b)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117756381 (lingo2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
Ig_2
LRR_9
V-set
LRRNT
Sp38
Motif
Other DBs
NCBI-GeneID:
117756381
NCBI-ProteinID:
XP_034432744
LinkDB
All DBs
Position
22:complement(19382711..19420195)
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AA seq
622 aa
AA seq
DB search
MTEGNVGKRDMRHPAPHHCHLILGGALVLLLVSSAFSCPARCECSAQSKSVSCHRKRLPT
IPEGIPIETRVLDLSKNKLRIVTPDNFSSFQQLEDLDLSDNLISVVEPGSFRSQLALRSL
SFRSNVLQLIPAGVLSGLTNLTRLDISHNRLVVLLDHAFQDLRRLSSLEVGDNELVFISQ
RAFTGLLGLQILTLERSNLTVVPTEALAHLHSLVELRMRYLSISFLKPFSFKRLSRLRTL
EIDYWPWLDTLPPLSLHGLNLTMLFITNTNLSALPGAALRNLPYLTHLNLSNCRIQHIHQ
GELGQLPHLLELRLQGAQLLSIEPFAFVGLKSLKLLDVSQNRLDSLERGVFASPESLQRL
CLGGNPLVCDCRLLWLLNSHKPPSLQILDVQPECTAPEHLLGKNLRDLKEPLVSRYMTCT
KPRIGPNTTQLLMADEGQPARLSCMAEGAPRPSVVWITPHRRYVTAKSSGRVEVQPDGTL
EIKAAELHDSGVYLCIASNPAGNASLSASLAVKSLSIGDRSPYSNRSSNYLTDSNSTWGN
GTVLYNMTVPIDIKTIIISTAMGCLSFLGVVVFCFLILFIWSRGKGRHKSNFDIEYVPRK
SNGAAAEVTETSGPRRVNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagagggcaacgtgggtaaaagagacatgcgacacccagccccgcatcactgccac
ctcatcctgggtggggcattggtgcttctcctggtcagctcagccttcagctgccccgcc
cgatgtgagtgctccgcccaaagcaagtcggttagttgccaccgcaagcggctgcccact
atccctgaaggcatccccattgaaacgcgcgtcctggacctcagcaagaacaaactacgc
atcgtcacaccggataacttctcttcattccagcagctggaggacctggatctcagtgac
aacctcatcagcgtggtggagcccggctcatttcgctctcagcttgctctacgctcgctc
agcttccgcagtaacgtgcttcagctgattcctgccggcgtactgtccggcctgaccaac
ctcacccgccttgacatcagccacaaccgactggtggttctcctggatcatgccttccaa
gatctgcgcaggttatcatccctggaggtgggtgataatgagctagtttttatctctcag
cgggcttttacagggttacttggactccaaattttgaccctggaacgttccaacctgacc
gtggtccctactgaggctctggcacatctgcacagcctggtcgaactgcgcatgcgctac
ctgagcattagttttctaaagcctttctcctttaagaggttatctcgtctccgcacacta
gagattgattactggccctggctggacacgctaccccccctctccctgcatggactcaac
cttacaatgttgttcataaccaacacaaacctgtctgccttgcccggtgcagcgctgcgt
aacctaccctacctcactcatctcaacttgtccaactgccgcatccagcacatccatcag
ggagagctgggccaactcccacatctgctggagctccgcctccaaggggctcagctgctt
tctattgagccgtttgcttttgtgggcctcaaatcgttgaaactattggatgtgtcacag
aaccgcctggactctctggagaggggagtgtttgcctcaccagagagcctccagaggctt
tgtctgggaggaaatccattagtgtgcgactgcagattgctttggctgctcaatagccac
aagcccccatctctgcagattctggatgtccagcctgagtgcaccgcccccgagcacctc
ctggggaaaaatctgcgtgacctcaaggagcctctggtgtccaggtacatgacctgcact
aaaccacgaattgggcccaacacgacccagttgctgatggctgatgagggtcagcccgcc
cgcctcagctgcatggcagagggagcgccgcggccctctgtggtctggattacacctcac
agacgctatgtcacagccaagagcagtggtagggtggaagtccaaccagatggtaccctg
gagatcaaggcagcggagctgcatgacagcggggtttacttgtgtattgccagtaaccct
gctggcaatgctagtctgtcagcctctttagctgtgaagagcctgagcattggggacaga
tctccctacagcaacaggagctcaaactatttgacagactctaacagcacatgggggaat
gggacggtactgtacaacatgacagtccctatagacattaagactatcattatatctaca
gccatgggctgcctgtccttcctaggtgtggtcgtgttctgcttcctgattctgttcatc
tggagccgagggaaaggacgccataagagcaactttgatattgaatatgtccctcgcaaa
tccaacggggcagcagctgaggtgacagaaacaagcggcccgagacgggtcaacatgaaa
atgatttga
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