Hippoglossus hippoglossus (Atlantic halibut): 117760406
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Entry
117760406 CDS
T07778
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117760406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117760406
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Major cadherins
117760406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
117760406
NCBI-ProteinID:
XP_034439304
LinkDB
All DBs
Position
4:2539..21581
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AA seq
1190 aa
AA seq
DB search
MITVSSPVFALLLFVVVPVVRANSGDNLARKRREWILPPKPLKENVNYTHQESIVKIRSD
VLDSGILYSLEGIGANQFPFNVFVVNPKTGFIRVTQVLDREYIDTYNLSGVATKSNGLDA
ERKIDIRIKVVDENDNAPKFGVIKNGEVDELSLAGTSVMKITATDADEPGNPNSQIAYSI
IDQNPPNDMFHITKDGTILVNNPLDREKADQYTLTVKGQDLNGQSEGKSATSTVTINVRD
VNDNLPTLEKEEYEGSIEENTEGVEVMRIKAKDLDQEATDNWEAVFDIIKGNEAEYFSIR
TDPKTNEGILMLDKAVDYEDVKDLDLGLVVRNKAPFFNGSGVNTGAGIGFSGGGGEAGGA
GGGGGGGAGGGGGGGAGGGGGGGSGGGGAGGGGGGGSGGGGGGGGGGGGAGGSGAGGVSG
GSSWQSGSTFKTYPIKINVKDKQEGPHFHPKVKAIPISEEGHSINMKDAIAHYFALDGDT
GKPAENVRYAKGSDPDNWLNIDPETAKITLNKIPDRESPYLVNGTYIAKVLCITNDMPSK
TATGTVAIQVEDVNDHCPTLTNNIQTICTTVDAVIVSAKDEDAFPNGPPFDFIIVPEGTK
GKWQVEHLNDTAAILRVQESVWPGFYEVKLVVKDEQGKACPEPQMVKVQVCTCEDGMVCA
KHGANGGADFGAAGIGLLFLGLLLLALIPLLLLFCQCGGAAGVSGGFTEMPFDTKSHLIN
YHTEGQGENTEVPLLNMLPQMEGDMFNMGIGMVGKTSAMAPRATFDFQKSVTSMDGINRV
HQDGFAGDHREETWGMMNQPSASGFHSEFEGRESGGGGGIYDGMALPDHFLEQYYTQKLD
NGNKNLAVKNSLLVYDYEGQGSSAGSVGCCSLLESDDDLHFLDDLGPKFKTLAEVCGGKQ
ILTEVKQVFTPAAMNTQTSVSRFVNEPQLPPPTQLQPTVSNIEQTVVRDISERSDQMINE
TMTTKRREMANQDQMLLVQQQQPVYYTTTPRLQPTHYVVQPQIQNTMLLAEAPANNLQGM
VLVNSTQTGPSPCMVVQGQVVMSSGQYQGPHVMLVESNGIQVDGTDRIYAGNICGSQIMM
VEEDKVPAKSMKVVKGIQTCHIPGGTRQPGGLLRSQRGLVVGGPTSNGGQLVQEAEGVSE
KCDVSGSMRVLCSESSTSSGSQNRVVGSSIMSSATPTYRKMVIQQTREIQ
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgattacagtttcttcacccgtgtttgcgctgctactgtttgtggttgttcctgtggtg
agggccaactctggagacaatctggcaagaaaaagaagagaatggattctccctccaaag
cctctgaaagaaaatgtaaactacactcatcaggaatctatagtcaagatccgatcagat
gtacttgattcaggcattttgtactcccttgagggcattggtgcaaaccaatttcccttc
aatgtatttgtcgttaaccctaaaactggattcattcgtgtgacccaagtgcttgacagg
gagtatattgatacatacaatctgtcaggtgttgctacaaaaagtaatggccttgacgca
gaaagaaaaatcgacatacgaatcaaggttgtagatgaaaatgacaatgctccaaagttt
ggagtgatcaagaacggggaggtggatgagctcagtcttgcagggacatcagtaatgaaa
atcactgcaactgatgctgatgaaccagggaatccaaactctcagattgcctatagcatc
atagatcagaatccacccaatgacatgtttcacattaccaaagatgggacaatcctcgtt
aacaaccccctggatcgagagaaagcggatcagtacactttgacggtgaaaggtcaagac
ctaaatggccaatcagagggaaaaagtgcaactagtactgttaccattaatgtgcgggac
gtgaatgacaatcttccgactctggaaaaagaggagtatgagggcagcattgaggagaac
acagaaggcgtggaggtgatgagaatcaaagcaaaggacctagaccaggaagccacagac
aactgggaagctgtgtttgatattattaaaggcaatgaggctgaatactttagcattaga
acagaccccaagaccaatgagggcatcctaatgcttgacaaggcagtggactatgaagat
gtgaaggaccttgacctaggactagttgtaagaaacaaggctccattttttaatggatca
ggggtcaatactggagctggtataggtttctcaggtggaggaggagaagctggtggagca
ggtgggggaggtgggggaggggcaggtgggggaggtgggggaggtgcaggtgggggaggt
gggggagggtcaggtgggggaggtgcaggtgggggaggtgggggagggtcaggtggtgga
ggcgggggagggggagggggagggggggcaggtggctctggtgcaggaggtgtgtctgga
ggatcatcatggcaaagtgggtctacatttaaaacttatccaatcaaaatcaatgtgaag
gataagcaggaggggccacattttcaccctaaagtcaaagccatcccaatctcagaggaa
ggccactccattaacatgaaagatgctattgcccactactttgcattagatggagacact
gggaaacctgctgagaatgtcaggtatgccaaaggctcagaccctgacaactggctaaac
atcgacccagaaacagccaagatcacactaaacaagatacctgacagagaatctccatac
ttggtcaatgggacatacattgctaaagtactctgcattacaaatgacatgccaagtaag
acagccactggcactgtagccatccaggtggaagacgttaatgaccactgtcccaccctg
accaataatatccaaacaatctgtaccacggttgatgctgtcattgtgagtgctaaagat
gaggatgcattccctaatggacctccttttgacttcattattgtcccagaaggaactaag
ggcaagtggcaggtggagcatctcaatgatactgcagctatccttagggttcaggagtcc
gtgtggcctggtttctatgaagtgaagcttgtagtgaaggatgaacagggcaaggcctgt
ccagaaccacagatggtaaaggtccaagtttgtacctgtgaggatggaatggtgtgtgca
aaacacggtgccaatggaggagcagactttggggctgcaggcatcggattgctgttcctg
ggcctgctgctgttagcactcattcctctgttgctgctcttctgccaatgtgggggggct
gcaggtgtttcaggaggctttactgagatgccttttgacaccaaatcacacctcattaac
tatcacactgagggccagggagaaaacacggaggtaccactgctgaatatgctaccacaa
atggaaggagatatgttcaacatgggtataggcatggttggcaaaacttcagcaatggcg
cccagggcaacttttgattttcagaagtcagtcacttccatggatgggattaacagggtc
catcaagatggatttgccggtgaccacagagaagaaacctgggggatgatgaaccagccg
agcgccagtggcttccactctgagtttgaaggcagagaatcaggaggaggtggaggaatt
tatgatggcatggctctgccagaccactttctggaacagtactacactcagaagctggac
aatggaaacaagaaccttgcagtgaagaacagtctgttggtttatgattatgaaggccag
ggttcctctgctggctctgtgggatgctgcagcctcctggagtctgatgatgacctgcat
ttccttgatgatcttggaccaaagtttaagaccctggctgaggtgtgcggaggcaagcaa
attctaactgaagttaaacaagtgttcactcctgccgcaatgaacacacagacctcagta
tcaaggtttgtgaatgaaccacagctgccccctccaacccagctgcagccaactgtctcc
aacatagaacagactgtagtcagggatatatctgagcgttcagatcagatgatcaatgag
accatgaccacaaagagacgagagatggcaaatcaagatcagatgctcttggtacagcag
cagcagcctgtgtactacaccacaactccacggctgcagccaacgcactacgttgtccag
ccacagattcagaacactatgctactagctgaggcaccagccaacaacttacagggcatg
gtactggttaacagcacccagactggaccttccccatgtatggtcgttcagggtcaggta
gtaatgtctagtggacagtaccagggcccccatgtgatgctcgtggaaagtaatggaatc
caggtagatggcactgaccggatctatgctggaaacatctgtggctcccagatcatgatg
gttgaagaggacaaggtccctgcaaagtcaatgaaagtggtgaaagggatccagacctgc
cacattccgggaggcactcgacagccaggagggcttttgagatctcagagaggcctggtg
gttggagggccaacaagcaatggagggcagctggtccaggaggcagaaggagtgtctgaa
aagtgtgatgtatctggttctatgagagtcctttgcagcgagagcagcacatcctctggc
tctcagaaccgtgtggtgggttcctctatcatgtcgagtgcaacccccacttaccgcaaa
atggtgatccagcagaccagagaaattcaatga
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integrated database retrieval system
