Hippoglossus hippoglossus (Atlantic halibut): 117763551
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Entry
117763551 CDS
T07778
Name
(RefSeq) nidogen-1-like
KO
K06826
nidogen (entactin)
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117763551
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
117763551
Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
117763551
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2F
NIDO
EGF_3
Ldl_recept_b
cEGF
Thyroglobulin_1
EGF_CA
FXa_inhibition
EGF
SGL
hEGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
117763551
NCBI-ProteinID:
XP_034444654
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Position
1:30382491..30405592
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AA seq
1274 aa
AA seq
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MSRWSVCCCLLSLVLMSRALEQEELLLFGAAAGDQELPPGSDSTAELRPDGEVLFFKKSY
SQDLYINTNGFVSLVAPPAESVYLGKMPASFPMIAALLGDLDNSDGQGTVFYRQDRSPEV
LSRAAEHIKQAFPREEGVEPLNVLVVTWVDMAARGTSGRGDGLDAKRNTFQLVVASTKSS
SYAILLYPTDGLQFLSTSVGGENKLLEAGFNEGMVQGWFQNNQGTYYQTTTDEEASIREL
TEKTNSGRKGVWVYEIGPSRFFVTIIPGMVTGLPEEKGTTEPPVTVLPRQPDEQQEEDFS
TYTTQTTMSTEAATEEKEEFHTDSTAAYQTGYTETVTPGFVKPDNEEEFPESETVTYNSP
ERVHPRYPDHPEPVQPRYISPEPVQPGPPHSQPQHPQIVVVDEDEDLDVDVFAYNLETCA
HNRHRCSSFADCRDYSNGYCCHCRPGFYGNGKDCVAEGKPQRMNGKVNGRVFVGNSPSPV
EFSNNDLHSYVVANDGRAYVAISNIPTSMGPSLQPLSSLGGVIGWAFALEQPGYHNGFSL
IGGVFSRQAEVIFQPGNERLNIKQQFKGIDAHDHLVVSTELEGRLPPIPLGSSVQINPYQ
EIYQYDRNLITSSSNRDYAITSPDGTVQTRSYQWRQTITFQSCPHNEGTRAAPSTQQLSV
DQIFVMFDADNNLTRYAMSNKIGSVHSSLPEQNPCFTGRHGCDINAVCRPGEGLRFTCEC
AAGFTGDGRYCHDIDECRETSWICGSSSVCSNQPGTFRCECLTGFMFASDGKTCIEEDRP
VDHCQTGSHDCDVSDRALCSYTGGSSYVCSCLPGFEGDGRSCQDVDDCRLDRCHGDALCS
NTPGSYTCQCRPGFHGDGYQCRPTSAEREKTQCEHQRESAQAAASSSSFFSFFRPRPAVG
QYVAQCDEHGAFEPSQCHASIRQCWCVDATGQEIPNTRTGASNAPLCINHAVTPPPLGPT
PRPDVQPVAPGTHLLFAQSGRIELLPLDGYNMKREDAKPLLHVPDRVVIAIAYDCVDKMV
YWTDITGPAISRASLSGGDVTQVVTTELQSPEGVAVDHVSRLLFWTDSMRDTVEVSQLDG
SQRRVLFDSDLVNPRAIVTNPPYGRLYWADWDRDGPKIEMSNMDGTERSVLVKDDLGLPN
GLTFDLDTQQLCWADAGTHKVECMDPHQRIRRQIVDRIQFPFSLVSLGRRLYYTDWRREA
VVAVDRHSETETEEFLPQRRSRLYGITTTTTQCPQVYNYCINNGGCSHLCLPRLGGFTCR
CPDAAAGRCEDRKS
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgagccggtggtcggtgtgctgctgcctgctgagtctggttctgatgagccgggctctg
gagcaggaggagctgctcctgttcggagctgcagccggagaccaggagctgccgccggga
tccgactccaccgcagagctgcgtccggacggagaagttctgttcttcaagaaaagttac
agtcaggatctttatattaacaccaatggatttgtgtcgctcgtcgcccctccagctgag
agcgtgtacctggggaagatgcccgccagttttccaatgattgccgctctgctgggagac
ctggacaacagtgacggacaagggacggtcttctaccggcaggacagaagcccggaggta
ctgagtcgagccgctgagcacatcaaacaagctttccccagagaagaaggagtcgagccc
ctcaacgtcctcgtcgtcacctgggtggacatggctgctcgggggacttccggtcgagga
gacggattggacgctaagaggaacacgttccagctggttgtggcctccacgaagtcctcc
tcctatgccatcctcttatatccgacagacggcctgcagttcctctccacgtctgttggg
ggtgagaataagctcctcgaggccggcttcaatgaaggcatggtgcagggctggttccag
aacaaccaggggacgtactaccaaaccacgacagatgaagaggcctccatcagggaactt
actgaaaagacaaactcaggacgcaaaggagtttgggtgtatgagattggtccttcgcgg
ttctttgtcaccatcataccaggaatggtcactggtcttcctgaggagaaagggacaact
gaacctcctgtgacggtgttgccaagacaacccgatgagcaacaggaggaggacttttca
acctacacaacccagacgacgatgtccactgaagcagcaacagaagaaaaggaggagttc
cacaccgatagtaccgctgcgtatcaaactggttacacagagaccgtcacaccagggttt
gtcaaaccagataatgaagaggaatttccagaatccgagactgtcacatacaacagtcct
gaaagggttcatccacgttacccagaccatcctgaaccagtccaaccacgatacatcagt
cctgaaccagtccaaccagggcccccccattcccagccccaacacccccagattgttgtg
gtggatgaggacgaagatctggatgtagatgtatttgcgtacaatctggagacctgtgct
cacaacagacacagatgctctagttttgcggattgtcgggattacagtaacgggtactgc
tgccactgcaggccgggtttctacggtaacgggaaggactgcgtcgcagaaggtaaaccg
cagagaatgaatggaaaggtcaatggtcgagtgtttgttgggaactcgccttcacctgtg
gagttcagtaacaacgacttgcactcatacgtggtggccaatgacggacgggcctacgtg
gccatcagcaacatccccacaagcatggggccctccctgcaaccgctgtcctccctggga
ggagtcatcggctgggccttcgccctggagcagcctggctaccacaatggcttcagtcta
attggtggcgttttttcccgacaggctgaggtgatcttccagcctggaaacgagcgtttg
aacatcaagcagcagtttaaaggcatcgacgcacacgaccacctggtggtgagcacagag
ctggagggacgtctaccccccatcccgctgggatcctctgttcagatcaacccgtaccaa
gagatctaccagtacgacagaaacttgatcacttcctcctcaaaccgcgactacgccatt
acgtcccctgacggcactgtccagactagaagctaccagtggcgtcagaccatcaccttc
cagagctgccctcacaacgagggaaccagggcggcaccttccacccagcagctcagcgtt
gaccagatctttgtgatgtttgatgccgacaacaatctgacccgctacgccatgagcaac
aagatcggctccgtccacagcagtcttccggagcagaatccatgtttcaccggccgacac
ggctgcgacatcaacgctgtgtgcagaccgggcgaaggcctccggttcacttgtgaatgt
gctgccggcttcactggagacggacgctactgccacgatattgacgagtgcagggagacg
tcctggatctgtgggtccagctccgtctgcagtaaccagcccggaaccttccgctgtgag
tgtttgaccggattcatgttcgccagcgatggaaagacctgcatcgaggaggatcgtccg
gtggatcattgtcagacaggaagtcatgactgcgatgtttctgaccgagctctgtgcagc
tacaccggaggttcgtcgtacgtgtgctcgtgtctcccgggcttcgagggcgacggccgc
tcgtgtcaagacgtggacgattgtcggctggatcgttgccacggtgacgccttgtgctcc
aacacgccgggctcctacacctgccagtgccgccctggtttccatggtgatggataccaa
tgcaggcccacatccgcagagcgagagaagacgcagtgcgagcatcagagagaaagcgct
caggccgccgcctcctcctccagcttcttctccttcttccgtcctcgaccggccgtcggt
cagtacgtggcacagtgtgatgagcacggagccttcgagccgtcgcaatgtcacgccagc
atcagacagtgttggtgtgtggacgccacgggtcaggagatccccaacacccggaccgga
gccagcaacgctcctctgtgtattaaccacgcagtgactcctccccctctgggtccgacg
ccgcggcctgacgtacagcccgtcgctccggggacacacctgctgttcgctcagagcggg
agaatcgaacttcttcctctggacggatacaacatgaagagagaggacgccaaacctctg
ctgcacgtccctgaccgggtggtgatcgccatcgcctacgactgtgtggacaagatggtt
tattggacagacatcacggggccggcaatcagccgggccagtctgagcggcggagacgtc
acccaagtggtcaccacagagctgcagagtcctgagggcgtggccgtcgaccacgtgtcc
cgcctcctcttctggacggactccatgagagacacggtggaggtgtcacagctggacggc
agccagagacgagtcctgttcgattccgacctcgtcaacccccgagccatcgtcaccaac
ccaccgtacgggcgtctctactgggccgactgggacagagacggacctaaaatcgagatg
tccaacatggacgggacggagcgcagcgtcctggtgaaagacgacctgggacttcccaac
ggtttgacctttgacctggacacccagcagctgtgttgggccgacgctgggactcacaag
gtcgagtgtatggatcctcatcaacgaatcaggagacagatcgtcgacaggattcagttt
ccattctctctggtgtcgttaggacggagactttactacactgactggaggagagaggcc
gtggtcgccgtcgatcgtcactcggagacggagactgaagagtttctgccacagagacgc
tcgcgcctgtacggcatcaccacgacaaccacacagtgtccacaagtttataattactgc
atcaacaacggtggctgctctcacctgtgtctgccgcgacttggcggcttcacctgccgc
tgcccggacgccgccgccggccgatgtgaggacaggaagtcgtga
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