Hippoglossus hippoglossus (Atlantic halibut): 117765247
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Entry
117765247 CDS
T07778
Symbol
cacna1fb
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1F subunit
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04020
Calcium signaling pathway
hhip04260
Cardiac muscle contraction
hhip04261
Adrenergic signaling in cardiomyocytes
hhip04270
Vascular smooth muscle contraction
hhip04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117765247 (cacna1fb)
04020 Calcium signaling pathway
117765247 (cacna1fb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117765247 (cacna1fb)
09153 Circulatory system
04260 Cardiac muscle contraction
117765247 (cacna1fb)
04261 Adrenergic signaling in cardiomyocytes
117765247 (cacna1fb)
04270 Vascular smooth muscle contraction
117765247 (cacna1fb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117765247 (cacna1fb)
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117765247 (cacna1fb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117765247
NCBI-ProteinID:
XP_034447512
LinkDB
All DBs
Position
7:26672857..26701122
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AA seq
2078 aa
AA seq
DB search
MCEENRASAGRNGYTKAVDGEEGGGEGEEEEEGGEVDGEGGGGEERDGEWDEELDGENEG
SVRMTRTDTLHSTTSSTGTQRRRGLHAKKQVQGSNQVQRAPRALYCLKLNNPIRRAALSI
VEWKPFDIFILLAIFANCVALGVSKPFPEDDSNSTNHDLEQVEYVFLIIFTIETFLKILA
YGLVMHPSSYIRNGWNLLDFVIVIVGLFSVVLETMTHKSGEQATTHHVPGKPGGLDVKAL
RAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHR
TCYYMGADNYVEDDPVPCAFAGHGRQCAINGTECRGRWDGPNGGITNFDNFFFAMLTVFQ
CITMEGWTDVLYWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKAR
GDFQKLREKQQMEEDLCGYMDWITQAEDMDELDEDGNPRPSLGDLSDKKRGKFGWFSHSN
DTHASLPASDTASTNTENIDEEHTNCCQACCSQVMKISCCRTLRRWNRVCRRNCRTAVKS
VTFYWLVLLLVFLNTSLSASEHYNQPDWLTEVQDIANKVLLSLFTLEMLLKMYSLGLAHY
FVAFFNRFDCFVVCGGIVETILVEIGIMPPLGISVLRCVRLLRIFKVTRHWTALSNLVAS
LLNSMKSIASLLLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLTCFQIL
TGEDWNMVMYDGIMAYGGPVFPGMIVSVYFVILFICGNYILLNVFLAIAVDNLAGGDGDD
KKRRGRGEGEEEEEEVEDEEVKVDIDEDTEYEEEEEPPEGQDDAGVQLKMADLAPPKEKV
LPIPEGSAFFCLSNTNPIRVACHTLIHHHIFTNLILVFIILSSCSLAAEDPIRAHSFRNN
ILGYADYAFTSIFTVEILLKMTVHGAFLHQGSFCRNWFNLLDLLVVSVSLVSFFLHSSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIMIVTTLLQFMFACIGVQLF
KGKFYRCTDEAKHTPDQCKGTFVVYKDGDVSHPMVRVRLWQNSDFNFDNVLMGMMALFTV
STFEGWPALLYKAIDANGENSGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFRE
QGEQEYKNCELDKNQRQCVEYALKAQPLKLYIPKNPVQYKFWSIINSTWFEYVMFVLILL
NTVTLAVQHYEQSKRFSHIMDILNMVFTGLFTAEMLLKLLALRLRHYFIDAWNSFDALIV
VGSVVDIVVTEFSSGEDSSRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSLQALPY
VALLIAMIFFIYAVIGMQTFGKVAMQDHTQINRNNNFQTFPQAVLLLFRCATGEAWQEIM
LASLPGKRCDPESDYEPGEEFSCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTR
DWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLV
AMNMPLNADGMVTFNATLFALVRTALKIKTEGNPEQENEELRGIIKKIWKRMKPKLLDEV
IPPHEDEEVTVGKFYATFLIQDYFRKFRKRKEKGDLTGEPDATNPSAIQLCKAGLKTLQD
LGPEMRLALNEDLDEDEEEDVMMEDEELEENTAYKGENGFGPERDRRGSTLATPTGPGGV
VGDVGVSNGGLIHRVGSLTKMPNGSDHDENLHRGDNMRSSVNHHHQRRPSEKNGILDRAH
KRPSYYKHGRRDSRDRYWRNGDTETYGEQGYYSRDEDNDSITSRDRHYPDDPRMYRDHYD
GHAPDTNNSYGNGYNEERRTTRRRLLPATPTGRKPSFNIQCLRRQGSSDDLPIPGTYHPT
SPPRRTRTQTFSNYETHQSSGRPMPASSTSWANPCPRRGRLLYAPLILVEEEGSPPWGGG
GPGGERTKGEAGRGVSVTGAEPRPVWYSGPAGTSAPPPPPYRAYTTLRVPSQLGAQFTEK
RGSADSLVEAVLISEGLGLYARDPKFVAFAKREIADACHMTVDEMESAASDLLGSASHSL
LSNTPATDPAALYSDEEPIRTGRDEDELADEMTCVTSF
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaggagaaccgagcaagtgccggtcgcaacggctacaccaaagcagtggatgga
gaggaggggggaggagagggggaggaagaggaggagggaggagaggtggatggagaagga
ggaggaggcgaggagagggatggagagtgggacgaagagctggacggagaaaacgaggga
agtgtgaggatgacaagaaccgacacgctgcactcgaccacaagttcgactggaacacag
aggaggagaggactacacgctaagaaacaggtgcagggcagtaatcaggtccaacgcgct
cctcgagctttatattgtctgaaactgaacaatccaatcagacgagccgctctctctatc
gtcgagtggaaaccctttgatatcttcatcttgttagccatctttgctaactgtgtcgct
ctgggagtttccaaaccgtttcctgaggacgactccaactccaccaaccacgacttggaa
caagtggagtacgtcttcctcatcatcttcaccattgagaccttcctgaagatcctggcc
tacggtctggtgatgcacccgagctcctacatccgcaacggctggaacctgctggacttc
gtcatcgtcatcgtcggattgttcagcgtcgtcctggagacaatgactcataagtctggc
gagcaggcgaccactcaccacgtgccggggaaacctggaggtctggatgtcaaagctctg
agagccttcagggtcctgaggcccctgaggctggtctctggagtccccagtctgcagatc
gtgttgaactccatcatgaaggcgatggttcctctgcttcacatcgctctgctggttctc
ttcgtcatcatcatctacgccatcattggcctggagctcttcatcggacgcatgcatcgg
acctgctactacatgggagcagataactacgtggaggacgacccggtgccgtgtgcgttt
gccggtcacggtcgtcagtgcgcaattaacggcacagagtgtcgagggaggtgggacggt
cccaatggaggaatcaccaactttgacaacttcttctttgccatgttgaccgtgttccag
tgcatcacaatggagggatggaccgacgtgctgtactggatgaacgacgccatcgggttt
gagctgccctgggtttattttgtcagtctggtgattttcggctcgttcttcgttctcaac
ctggttctgggagtcctcagcggagagttcagtaaagagagggagaaggcgaaggcgcgg
ggagattttcagaagctgcgcgagaagcagcagatggaagaggatctgtgtggatacatg
gactggatcactcaggctgaggacatggacgaactggacgaggacggaaacccacgtccg
tctctgggcgacctgtccgacaagaagagagggaagtttggatggttcagtcactccaat
gacacacacgcaagtcttcctgccagtgacacagcgtctacaaacactgaaaacattgat
gaggaacacaccaactgctgtcaggcctgctgctcccaggtgatgaagatcagctgctgt
cggacgttgcgtcgctggaatcgcgtctgtcgcagaaactgtcgcactgctgttaaatca
gtgacattttattggctggttctgctgctcgtcttcctcaacacctccctcagcgcgtcc
gagcactacaaccaacctgactggctgacagaagtccaggacatcgccaacaaggtgctg
ctgtccctgttcacgttggagatgctgttgaagatgtacagtctgggtctggctcattac
ttcgtggcgttctttaaccgcttcgactgtttcgtggtgtgtggcggcatcgtggagacc
atcctggtggagataggcatcatgcctcctctggggatctctgtgctgcgctgcgtccgc
ctcctgcggatcttcaaggtcacacgccattggacggctctgtccaatctggtcgcgtcc
ctactgaactcgatgaagtccatcgcctccctgctgctcctcctcttcctcttcctcatc
atcttcgctctgctcggcatgcagctgttcggaggaaagtttaactttgacgagacgcag
accaaacgcagcacgtttgacgccttcccgcaggcgctgctcacctgcttccagatcctg
acaggcgaggactggaacatggtcatgtacgacggcatcatggcgtacggcggccccgtg
tttccagggatgatcgtctctgtttacttcgtcatcctcttcatctgtggaaactacatc
ctgctgaacgtcttcttggccatcgccgtggacaacctggccggaggagacggagacgac
aagaagaggagggggcggggggagggggaggaggaggaggaggaggtcgaagacgaagaa
gtgaaggtggacattgatgaagacaccgagtatgaggaggaagaggagcctcctgaagga
caagacgatgcgggggtccagttaaagatggccgaccttgctccacctaaggagaaggtc
cttcccatcccagaaggcagtgcgttcttctgcctcagcaacacgaaccctatccgtgtg
gcctgtcacactctgatccatcaccacatcttcaccaacctcatcctcgtcttcatcatc
ctcagcagctgctcattggctgctgaggatccaatcagagcccactccttcaggaacaac
attctgggttatgcggactacgccttcacctccatcttcactgtagagatcctgttaaag
atgacggtccacggagcgttcctccatcagggctccttctgcaggaactggttcaacttg
ttggatctactggtcgtcagcgtctcactcgtctccttcttccttcactccagtgccatc
tcggtggtgaagatcctcagagtcctcagggtgctgcgacctctgagagccatcaacaga
gccaaaggcctcaagcacgtggtccagtgtgtgtttgtggccatcaagacgatcggaaac
atcatgatcgtcacgactctgcttcagttcatgttcgcctgcatcggagttcagctgttc
aagggtaaattttatcgctgtacggacgaagccaaacacacacctgatcagtgcaaaggg
acgtttgttgtgtataaagacggagacgtgagtcacccgatggtccgagtgcgtctgtgg
cagaacagtgacttcaactttgataacgtgttgatggggatgatggcgctcttcaccgtc
tccaccttcgagggctggccagcactgctgtacaaggccatcgatgctaacggggagaac
tctggtcccatctataactaccgcgtggagatctccatcttcttcatcgtctacatcatc
atcatcgccttcttcatgatgaacatcttcgtaggtttcgtcatcatcacgttcagagag
cagggagagcaggagtacaagaactgtgagcttgacaagaaccagcgtcagtgtgtggaa
tacgctctgaaggctcagcctctcaaactctacatccccaagaatccggtccagtataaa
ttttggtcgatcatcaactcgacatggtttgagtacgtgatgttcgtcctcatcctgctc
aacaccgtcacgctggctgttcagcactatgaacagtccaaaaggttcagccacatcatg
gacatcctgaacatggtgttcactggactcttcactgcggagatgctgctgaagctgctc
gctctcagactcaggcattatttcatcgacgcctggaactcattcgatgctctcatcgtg
gtcggcagcgtggtcgacatcgtggtcacggagttcagtagtggagaggacagctctcgt
gtgtccatcaccttcttcaggctgtttcgagtcatgcgattggtcaagctgctgagtaaa
ggggaagggattcgtacgctgctctggacgttcatcaaatcactgcaggcgctgccatat
gtcgctctgctcatcgccatgatcttcttcatctacgccgtcatcggcatgcagacgttt
ggaaaggtggcgatgcaggatcacactcagatcaacaggaacaacaacttccagacgttt
cctcaggctgttctcctcctcttcaggtgtgcgacaggtgaggcgtggcaggagatcatg
ttggcgagtcttccaggaaaacgctgtgaccccgagtcagactacgaaccaggagaagaa
ttcagctgcggcagcaacttcgccatcgtttacttcatcagcttcttcatgctctgtgct
ttcctgattatcaacctttttgtcgccgtcatcatggacaattttgactatctgacacgt
gattggtcgattctgggacctcatcacctggacgagtttaagaggatctggtctgagtac
gaccctgaggccaaaggtcgaatcaaacacctggacgttgtggctctgctcaggaggatt
cagcctcctctggggtttgggaagttgtgtcctcacagagtggcctgtaagcgtctggta
gcgatgaacatgcctctgaacgctgacgggatggtgacctttaacgctacgctcttcgct
ctggttcgcacggcgctcaagatcaagactgaaggtaaccctgagcaggagaacgaggag
ctgagggggattatcaagaagatctggaagagaatgaaaccaaaactactggacgaagtg
attccaccacatgaagatgaggaagttaccgttggaaagttttatgccacgtttctgatc
caggattatttcaggaagttcaggaagaggaaggagaaaggagatttgaccggagagcct
gacgccaccaacccgtctgctatacagctgtgtaaagccggtctgaagacgctccaggat
ctgggtccagagatgcgtctggctctgaacgaggacctggacgaggatgaggaggaggac
gtcatgatggaggatgaggagctggaggagaacactgcttacaagggtgaaaacggattt
ggaccagagagagatcggcgaggctccaccctggccacgcccacaggtcctggcggtgtt
gtcggagacgtgggtgtgtctaatgggggtctgatccaccgggtcggttctctcactaag
atgccaaatggcagcgaccacgacgaaaatcttcaccgtggagacaacatgaggtcatct
gtcaatcatcatcatcagcgacgcccatcagagaagaatggaatcctggaccgcgcccac
aagagaccgtcatactacaaacatggaaggagggactcccgggacagatactggaggaac
ggggacacagagacgtacggagagcaaggttactacagcagagacgaagacaacgacagc
atcacttccagagacagacattaccctgacgatcctcgaatgtacagagaccactacgat
ggacacgcccccgacaccaacaatagctacggtaacggatacaacgaggagaggaggacc
acacggagacgcctacttcctgctacgcctacaggtcggaaaccgtcgtttaacatccag
tgtctgaggaggcagggcagcagtgacgacctgcccatcccagggacctaccaccccacc
tcgccgccacgccgcacacgcacacagacgttcagcaattatgagactcatcaatcttcc
ggccgccccatgccggcctcctcgacgtcctgggcgaacccgtgtcctcgccgtggacgc
ctcctctacgctcctctcatcctggttgaggaggaaggcagtccgccctgggggggggga
ggaccagggggggaaaggacgaagggagaagcaggaagaggggtcagtgtgacaggagca
gaacccagaccggtgtggtacagtggccctgcagggacatcagcgccgccgccgccgccg
tacagagcctacaccacgctcagagttccctctcagctcggagctcagttcacggagaag
cgaggatcggccgacagtctggtcgaggcggttctgatctctgagggtctcggtctttac
gctcgggatcctaagtttgtggcgtttgcaaagcgagagatcgcagatgcatgtcacatg
acggtggatgagatggagtccgctgccagcgacctgcttggctcggcgagccacagttta
cttagcaacacccccgccactgaccccgctgctctctacagcgacgaggagccaatcaga
acggggcgcgacgaggatgaactggctgacgagatgacctgtgtgacatcattttga
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integrated database retrieval system
