Hippoglossus hippoglossus (Atlantic halibut): 117765811
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Entry
117765811 CDS
T07778
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 22 isoform X1
KO
K11366
ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:
3.4.19.12
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117765811
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhip03021
]
117765811
04121 Ubiquitin system [BR:
hhip04121
]
117765811
03036 Chromosome and associated proteins [BR:
hhip03036
]
117765811
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117765811
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117765811
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
117765811
Ubiquitin system [BR:
hhip04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117765811
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
117765811
SLIK complex
117765811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Peptidase_C98
Motif
Other DBs
NCBI-GeneID:
117765811
NCBI-ProteinID:
XP_034448213
LinkDB
All DBs
Position
8:12836841..12861218
Genome browser
AA seq
522 aa
AA seq
DB search
MSPAGCSHVNGYKVDNWKQNLRVIYQCFVWSGTAETRRRKVRQSDAGWTELAKSCICHMC
GAHLNRLHSCLYCVFFGCFTKKHIHEHAKNKRHNLAIDLLYGGIYCFVCQDYIYDKDMEQ
IAKEEQRKAWKLQGIGEKYTTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCF
MNCIVQALTHTPLLRDFFLSDRHKCEMQSNSCLVCEMSQLFQEFYSGHRSPHIPFRLLHL
VWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTIRDDNGKKANNPNHCNCIIDQIFTG
GLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDGSTVNGESHLSGSTTLT
DCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKIT
TYVSFPLELDMTPFMASSKESRMNGQYQQTVDVLNNDNKYSLFAVVNHQGTLESGHYTSF
IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagtccggccgggtgctcccatgtgaacgggtataaggtggataattggaaacaaaat
cttcgggtcatataccaatgctttgtttggagtggtactgctgagaccaggagacgcaag
gtgcgtcagagtgatgcaggatggacggagctggccaagtcgtgtatctgtcacatgtgt
ggcgcccacctgaaccgactccactcttgtctctactgtgtctttttcggctgttttaca
aagaaacacatccacgagcacgcaaagaacaagagacacaatctagcgatagacttatta
tacggtggaatatattgttttgtgtgtcaagactacatatacgacaaagacatggagcag
attgccaaagaggaacagaggaaagcgtggaaattgcaaggcataggggagaaatacaca
acatgggagccgaccaagagggagctagaactattacgacacaatcctaagcggaggaaa
atcactacaaactgtaccataggtttacgagggttaataaacctgggcaacacatgtttc
atgaactgtattgttcaggccctaacacacacgccgctgctgcgagacttcttcctctcc
gacagacacaagtgcgagatgcaatcaaactcctgtctggtgtgtgagatgtcgcagctc
tttcaggagttctactcgggccaccgttcaccccacattcccttccggctgctgcacctg
gtgtggactcacgcacgtcatctcgcaggctacgagcaacaagacgcccacgagttcctc
atcgcagcgctggacgttctacacaggcactgcaaaggggacactatccgagacgacaat
gggaagaaggccaacaacccaaaccactgtaactgcatcattgaccaaatcttcactggt
ggcctgcaatcagatgttacttgtcaagtttgccatggtgtttccacgacgatagatcca
ttctgggacattagcctggacctgcccggctcatccacgcctttctggcccctcagtccg
ggaggggatggcagcacagtcaatggagagagccacctttcagggtccaccacactcaca
gactgcctacgcagatttacgcggcctgaacatctaggaagcagtgccaaaatcaagtgt
ggcggttgccatagttaccaggaatccaccaaacagctgacaatgaagaagctccccatc
gtagcgtgtttccatctcaaacggtttgagcactctgctaaactgcggaggaagatcact
acatacgtttccttccctctagagttggatatgacgcctttcatggcatcaagtaaagag
agcagaatgaacgggcagtatcaacagacggttgatgtattaaacaacgacaataagtat
tccttgtttgcggtggtcaaccaccaaggcacattagagagtggccactacaccagcttc
atccgccagcacaaggaccagtggttcaaatgtgatgatgccataatcaccaaggccagc
attaaggatgtactcgacagcgaagggtatctcttattctaccataaacagttcctggag
tacgagtag
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