Hippoglossus hippoglossus (Atlantic halibut): 117766317
Help
Entry
117766317 CDS
T07778
Symbol
rfx1a
Name
(RefSeq) MHC class II regulatory factor RFX1a isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117766317 (rfx1a)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Other basic domains
RF-X
117766317 (rfx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
117766317
NCBI-ProteinID:
XP_034449108
LinkDB
All DBs
Position
8:complement(16256814..16269634)
Genome browser
AA seq
906 aa
AA seq
DB search
MATAGYVGEIQPAAQSQGAGVTVTPGQPDASSTPASAPQFLAEIQTAVATPTVVTPTGQT
APTEQATSIVTQKPAAGCQAQPTALAQSAQTQYVTAEIQGSPSETGNAQSTPQYIVVTVT
EGSLHSSDSLSDSSPPPAVVQTGVPTQVVQQVQTAQQQRSVVQATSQIAKTEPGTQLSVT
SLQPVHISQEVQQLTPVPVQHVYTNQVQYVEGGDTNYTTSTIRSSTFPYTDTPLYTQTTA
AQYYEGQPTSGSQASTPGTPLTVSVTAGTTGGVSMFVAQPTIAAGGGATVVTTGGTTNGA
GDGAGTNGGTAGSYVIQGGYMLGSSSGGAAGNSQNYSHTARASPATVSITEGEESSVPSA
DKKVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRR
LGTRGNSKYHYYGLRIKAGSSLLRLMEDQQHLAMRQQPFSQKQRLKPVHKVEGMTNGTAS
GAGQQQQQQQGSGHVDISTQVQQYQQFLDASRSLPEFADIDLQGKSLPEGIELEHIKSFQ
LLYREHCEAILDVMVNLQFTLVETLWKTFWRFSQSQDGDPTLAVHDESEKRLPKSCLVIL
CKYEPVLRWSRDCDNSLYQSLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTNAMMNIP
EEMVRIKVTSANAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQA
SWVCRCEDRVVQRLEQDFKLTLQQQNSLEQWAAWLDGVVSQVLKPYQHSSTFPKAAKLFL
LKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFA
SLGRGLTQLDPDKEEEEEEEDESDEEGQELSLPSDGVVLGEESLEPPAKLARTDQRVLFT
TGSADN
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcaggctacgtaggtgagatccagccggcagcccaatcccagggggctggt
gtcaccgtcacacctgggcaacccgatgccagctccacccctgcaagtgcccctcagttt
ctggctgagattcagactgctgtggctactcccactgttgtcacacccacaggccaaact
gctcccactgagcaagccacttccattgtcactcagaagcctgcagctggatgtcaagct
cagcccacagcactggcccagtcagctcagactcagtatgtgactgcagaaatccagggc
tccccttcagagactggaaatgctcaaagcactcctcagtacatcgttgtaacagtcaca
gagggctcccttcactcaagtgacagtttgtcggactctagtcctcctccagctgtggtg
cagacaggtgttcccacgcaggtggttcaacaggtgcagacggctcaacagcagaggtct
gtggtgcaggccacctcccagatagccaagactgagccagggacccagctcagtgtcacc
agtctacagcctgttcatatcagccaggaggtccagcagctcacaccagtgccagttcaa
catgtttacaccaatcaagtgcagtatgtggaaggaggagacaccaactacaccaccagc
accattcgctccagcaccttcccttacactgatacgcccctgtacacccagaccacagct
gcccagtattatgaaggtcagccaacttcaggctctcaggcctccacccctggcacgcct
cttaccgtctctgtgacggctggcacaacagggggtgtgtccatgtttgtggcacagccc
accattgcggcagggggaggagccacagtggtgaccacaggtggcaccaccaatggggca
ggggatggggcaggcaccaatggtggcacagcaggcagctatgtgatccaggggggttac
atgctgggcagcagcagcggaggggcagctggcaacagtcagaactactcacacaccgcc
cgcgcctccccagccactgtgagtattacagagggcgaggagagtagcgtgccgtcggca
gacaagaaggtacagtggttgctggacaactatgagacagctgaaggagtgagtctgccc
cgttccaccctctactgccactatctgctgcactgtcaggagcagaaactagagcctgtt
aatgctgcctcttttgggaaactcattagatctgttttcatggggctacgcacacgacgc
ctgggcactcggggtaattcaaagtaccactactatggcctgaggatcaaggcaggttcc
tctcttctccgtctgatggaagaccagcaacatctggccatgaggcagcagcccttctca
cagaaacagaggttgaagcctgtgcacaaagtggaaggaatgacaaacggcactgcgtca
ggagcaggccagcagcagcagcagcaacaggggtcagggcacgtggacatcagcacccag
gttcaacagtaccagcagttcttagatgcgtctagatctctaccagagttcgcagatatc
gaccttcaggggaagtctctgccggagggtatcgaactggagcacataaagagctttcag
ctgctgtacagagagcactgtgaggccatactggatgtgatggtcaacctgcagtttacc
ctggtggagacactgtggaagaccttctggagattcagccagagccaggatggagatccc
acgttggctgttcatgatgagtcagagaagcgtctccctaagtcctgcctggtgattctg
tgcaagtatgagccagtgctgcgctggagccgtgactgtgacaacagcctgtaccagagc
ctggtggagatcctcatccctgatgtcctcaggcccatccccagtgccttaactcaagcc
atccgtaattttgccaagagcctggagagctggctgaccaatgccatgatgaacatccca
gaggagatggtccgaatcaaggtaacttcagccaatgcgtttgctcagacactgcgtcgc
tacaccagtctgaaccacctcgcccaggcggcccgcgctgtcctccagaacacagctcag
atcaaccagatgctctcggacctcaaccgcgttgattttgcaaacgtccaggagcaggct
tcgtgggtgtgccggtgtgaagaccgtgttgtgcagcggctggagcaggatttcaagctg
acccttcagcagcagaactccctggagcagtgggctgcgtggctggatggtgtagtttcc
caggtcctaaagccctaccagcacagctctaccttcccaaaggccgctaagctcttcctg
ctcaagtggtccttttacagttccatggtaatcagggacttaaccctgcggagtgcagcc
agtttcggttcctttcacttgatccgcctgctctacgatgagtacatgtactacctgata
gagcacagagtggcccaggctaaaggagaaacccccatcgctgtcatgggagagtttgcc
agtttaggccggggtctaacccagctggatcctgacaaagaagaggaagaggaggaggag
gatgagagtgacgaggaaggtcaggagctttcccttccctcagacggggtcgtgcttgga
gaggagtctctggagccgcctgctaagctggccagaactgaccagagggtcctcttcacc
accggatcagctgacaactaa
DBGET
integrated database retrieval system
