KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117768125
Entry
117768125         CDS       T07778                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117768125 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hhip03041]
    117768125 (sf3a1)
Spliceosome [BR:hhip03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117768125 (sf3a1)
 Complex B
    117768125 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    117768125 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 117768125
NCBI-ProteinID: XP_034452133
LinkDB
Position
9:complement(19549287..19554349)
AA seq 780 aa
MPPGPVQIIQPESNNKNDAPVEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKGQEPSAAVPKVMQQAMLQAQQLAQ
KAQVIQETVVPKEPPPEFEFLADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRN
YQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLIKMKKEAENPREVMDQVRYRVEWAKF
QERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILIQE
RYEKYGESEEVEMEVESEDEDDEREVRDRGHPSQPDQDTQVQDMDEGSDEDDDGMKAPLP
PDNPMPPPLPPTPDQVIIRKDYDPKASKIQPSIIPTDEYLISPITGEKIAASKMQEHMRI
GLLDPRWLEQRDRIIKERQIEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEE
EIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDTKEKIGPSKPS
DHHQPHHMSSASNMQKPGPPMNLLPRPPMAPPVRTTLLSAVPVIPRQPMSPVVRLTSGQV
LSPMPPMMSAPRINMVPMSQAAQHIMAPRPPPMVVPTSFVPAPPVPQPPSSAPAPPSHPP
PPHDDEPMSKKMKTEENLISEEEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVLNFTVPL
TDQVSVIKVKIHEATGMAAGKQKLQYEGIFIKDSNSLAYYNMNNGSIIHLALKERGGRKK
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgttcaaatcattcagccggagtccaacaataagaatgatgcacca
gtagaagaaaccccagcgactaaaccgatcgttggtatcatatatccacctcctgaggtc
cgaaacatagttgacaagacagccagctttgttgccaggaatgggcccgagtttgaagca
agaatccgacaaaatgagatcaacaatcccaaatttaattttctcaatcccaatgacccc
taccatgcttactaccgtcacaaggtcaatgaatttaaggaggggaaaggacaggaacca
tctgcagcagtgcctaaagttatgcagcaggcaatgctgcaggcccagcagcttgctcaa
aaggctcaggtgattcaggagacagtagttcctaaagagccacctcctgagttcgagttc
ctcgcagatcctccatcaatctcagcatttgacctggatgttgtcaagctcactgcccag
tttgttgctcgcaatggccgccagtttcttactcagctcatgcagaaagaacagaggaac
taccagtttgactttctgcggccgcagcacagccttttcaactacttcaccaaactggtt
gagcagtacactaagatactgatccctcctaaaggcctactaatcaagatgaagaaagag
gctgagaatccaagagaggttatggaccaggtgaggtaccgtgttgagtgggccaagttc
caggagcgtgagagaaagaaagaggaggaggaaagggagaaagaacgagtggcatatgcc
caaattgactggcatgactttgtagtggttgaaactgtggatttccagcccaacgaacaa
ggccacttccccccacccaccacaccagaggaacttggtgcccgcatcctaatccaagag
cgctacgagaagtatggcgagagtgaggaggtggagatggaggttgagagtgaggatgaa
gacgatgaacgggaggttcgggacaggggccatccctcacaacccgatcaagacacacaa
gttcaggacatggatgagggatctgatgaagatgatgatggcatgaaggctccactgcca
ccagacaaccctatgccacccccactgcccccaactccagatcaggtcatcattcgcaaa
gactatgacccgaaagcttccaagattcagccctcaattatacctactgatgagtacctc
atctcaccaattactggtgagaagatcgcagccagtaaaatgcaagagcacatgcgtatt
ggtctgctggatccgcgctggctggagcaaagagaccgcattatcaaagagagacagatt
gaggatgaagtctatgctcctggtttggacatcgagagcagcttgaaacagttggccgag
aggcgtaccgatatcttcggtgtagaagagacagccatcggtaaaaagatcggtgaggaa
gaaatccagaagccagaggagaaggttacctgggatggccactcaggaagcatggctcgt
acccagcaagcagcacaggccaacatcacccttcaggagcagatcgaagccattcacaag
gccaaaggactagtgggagaggacgataccaaggagaaaattggcccaagcaagccgagt
gaccatcaccagcctcaccatatgtcgtctgcatccaatatgcagaagcccggtcctcct
atgaacttattgcctcgcccacccatggcccctccagtgcgcaccactctcctgtctgct
gtacctgtaattccaagacagcctatgtctcctgtggtgcgccttacatctggacaagtc
ttgtcaccaatgcctcccatgatgtctgctccccgcatcaatatggtccccatgtcgcaa
gccgcacagcacatcatggccccgagaccaccccccatggttgttccaacttcgtttgtc
ccagctcctccagtaccacaaccacccagctctgctccggctccaccttcccacccaccc
ccacctcatgacgacgagccaatgagcaagaagatgaagactgaggaaaaccttatttca
gaggaggagttccttcgcagaaataagggtcctgtggcagttaaagtacaagtccccaac
atgcaggacaagactgaatggaagctaaatggccaagtgctgaatttcaccgtcccgctc
acagaccaggtgtctgttattaaagtcaaaatccatgaagcgacaggcatggccgcagga
aaacagaagttgcaatacgagggcattttcatcaaggattccaactctctagcttattac
aacatgaacaacggctccatcattcacttggcgctgaaggagagaggtggaagaaagaag
tga

DBGET integrated database retrieval system