Hippoglossus hippoglossus (Atlantic halibut): 117770580
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Entry
117770580 CDS
T07778
Symbol
tra2a
Name
(RefSeq) transformer-2 protein homolog alpha
KO
K12897
transformer-2 protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117770580 (tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117770580 (tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117770580 (tra2a)
Protein phosphatases and associated proteins [BR:
hhip01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117770580 (tra2a)
Spliceosome [BR:
hhip03041
]
Common components
Common spliceosomal components
SR proteins
117770580 (tra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
RRM_3
Motif
Other DBs
NCBI-GeneID:
117770580
NCBI-ProteinID:
XP_034456056
LinkDB
All DBs
Position
11:12474653..12480799
Genome browser
AA seq
327 aa
AA seq
DB search
MSDIEDGTCDTRGSRSPSKSDRGSPARVKSERRSGSPSPSRASKRSESRSRSRSKSRSRS
GRHSNRHHSRSRSRSYSHRRKSHSRSYSPEQRRRRSQSASPVSSSRHQNGSRSQEFPKEA
SNQGADGDVRANPDPSKCLGVFGLSLYTTERDLKEVFSRHGPLAGVNVVYDQRTGRSRGF
AFIYYERLEDSKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTHNGSGGGGG
SGGGGSGGGGSGGGGGSSGGGGGGGGGGSSSRRGRDRERDSYNDRGYERYDRYEECDYRY
SRRRSPSPYYSRYRSRSRSRSYSPRRY
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatcgaggatggaacctgtgacacacgggggtcacgctccccatcaaaatcg
gaccgtgggagtccagctcgggtcaagtcggagagaaggtccggctccccgagcccatcc
cgagcctccaagcgctctgagtccagatcccgctctcgctcaaaatccaggtctcgttct
gggcggcactctaaccgccatcatagccgttcacgctctcgatcctattcccaccggagg
aagtcccattctcgttcctatagccctgaacaaaggcgtaggaggagccagagcgcttca
cctgtgtcaagcagccgccaccagaatggcagcaggagccaagaattcccaaaagaagca
agcaatcagggcgctgatggtgatgtgagggcgaaccctgaccccagcaagtgtttgggg
gtgtttggcttgagcctgtacaccacagagcgcgacctgaaggaggtgttttcacgacat
ggtcctttggccggtgtcaacgtggtgtacgaccagcgcacaggtcgctctcgtggcttc
gccttcatttactacgagagactggaggattctaaagaggcaatggagcgagccaatggc
atggagctggacgggaggcgcatccgagtggattattccattaccaaacgtccccatacc
cccacaccaggaatctacatgggccgaccaactcacaatggtagcggtggtggtggcggc
agcggtggtggcggcagcggtggtggcggcagcggtggcggcggcggcagcagtggtggt
ggcggcggaggcggcggcggcggtagcagcagcaggagggggagggacagggagagggac
tcttacaatgatcgtggctacgaacgctacgacagatacgaagagtgtgattataggtac
agtcgtaggcgctctccgtcaccgtactacagccgatacaggtctcgctcacggtctcgc
tcttacagcccacgacgatactaa
DBGET
integrated database retrieval system
