Hippoglossus hippoglossus (Atlantic halibut): 117771149
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Entry
117771149 CDS
T07778
Symbol
col28a1a
Name
(RefSeq) collagen, type XXVIII, alpha 1a
KO
K23619
collagen type XXVIII alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117771149 (col28a1a)
Peptidases and inhibitors [BR:
hhip01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
117771149 (col28a1a)
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
117771149
NCBI-ProteinID:
XP_034457148
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Position
11:20798124..20825433
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AA seq
1174 aa
AA seq
DB search
MTMPWLQLGLKLFIVILTLSHSTLCQSKRRKGQRDGNQIIIHEAKSLICPVEIMFIVDSS
EKARALLFERQKEFILRFSTKLVQLHSDGWRLRLRLAALQYSSTVSVEHNFRDWQDVDVF
QSRVAAMTFIGHGTYSAYGITNATQVFSRETSPSSLRVALLMTDGTDHPRSPSAVAAAAE
AKQHSIRVFVIRMSGLTNDGPLVTKLRSIASAPPQQHVLSLTDNQLDDRLFRELSTVVKT
GCPHPKTCLCERGERGHPGSPGKPGEQGSDGVPASKGSRGEAGINGRPGIEGLGGQPGSR
GEKGEQGECGAPGTKGDQAADGPPGPRGPRGEQGAMGGHGDQGPEGPFGSKGERGPRGAP
GPPGDNGIGFPGPKGDKGNQGRPGPPGPMGVGEPGMTGPAGPPGMQGSPGFPGEGLPGSN
GDRGYEGPKGSRGPPGFGYKGDKGNPGSPGLSGLVGFPGSGTQGDKGDQGLTGPSGPRGP
PGIGIVGPKGDQGFPGEPGPQGKRGDGEPGPKGKPGPNGTAGIPGIPGEDGAAGAKGEMG
LVGLRGSEGAPGKGISGEKGDRGDRGQRGLSGGPGPSGPAGAKGEPGSPGMTGQPGPAGR
GIPGPKGDPGPVGPTGPVGEPGMGIIGPKGNKGNPGPVGPPGMKGDGVPGPQGLPGLPGV
QGETGVDGRGLPGSKGDRGLPGVTGPSGPPGTGLYGPKGSTGQPGPSGVHGLPGEGIQGP
KGEPGFQGPVGPRGAPGDGLLGEKGDRGISGYRGKKGDKGNYGEPGSAGRKGRPGEKGGP
GLTREEVIRIIREICGCGLKCRESPLELVFVIDSSESVGPENFELVKDFMNGLIDRMSVS
TEASHIGVVLYSHVEMVVASLQRQTSKEDIKAAVRRMPYLGEGTFTGSAIHRAIQLFRAS
RPGVRKVAVVITDGLADPRDIMQFEETAAEAHYEGIEMFVVGVMNKTDPLYEDFQAEMNV
IASDPDANHVYFIDDFKSLHTLESVILSRVCEQDDTMAFLPNSIFPAVEIDADIPDATHF
KEFSEEENIQREHTVEAVTAPTLQSPESEWPDENLVDNELLVEPWNRLPELTFGSPAGAG
VTSIEGPQSQTQWLLDALSTQAPTSPSPPHLTDSSVPVGGCSQPLDPGPCRQYGVKWYYD
PEANACAQFWYGGCEGNANNFETEAKCRDSCIYT
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgccgtggttacagttagggctgaagcttttcattgtcattttgaccctctca
cactcaaccttatgtcaaagtaaaaggaggaaaggacagagagacggtaaccagatcatc
attcacgaggccaaaagcctgatctgcccagtggagattatgttcattgtggacagttca
gagaaagccagagctctgctgttcgagcgacagaaggagttcatcctgcgtttcagcacc
aagcttgtgcagctccactctgacggctggcggctgcggctgcggctggctgctctgcag
tacagcagcactgtttcagtggagcacaacttcagagactggcaggatgtggatgtgttc
cagagtcgggtggccgccatgaccttcatcggccatggcacctactccgcctatggcatc
accaacgccacccaggttttcagccgcgagacctcacccagcagcctgagggtggcgctg
ttgatgacggatggcacggaccatcctcgcagccccagcgcagtggcagctgctgctgag
gccaaacagcacagcatcagggtgttcgtcatcaggatgtcgggcctgaccaatgatggg
cccttggttacaaagctccgctccattgccagtgctcccccacagcaacatgttctcagc
ctcaccgacaaccagctggatgacagactcttcagggaactgagcacggttgtgaaaact
gggtgcccacatccaaagacctgcctctgtgaaaggggggaaaggggtcaccctggatct
ccagggaaaccaggggagcagggctcagatggagtgcctgcctcaaagggatctcgtggg
gaagctggaattaatggacgtccaggaattgagggccttgggggtcaacctggcagcaga
ggggaaaagggagaacaaggggaatgtggtgcccctggtacaaagggagatcaagcagca
gatggacctcctggccctagaggccccagaggagaacagggagccatggggggacatgga
gaccagggtccagaggggccgtttggctctaaaggtgaacgaggaccaaggggtgcacct
ggacctccaggagataatggcattgggttccctggtcccaagggtgacaaggggaaccag
ggaagaccaggtccacccggaccaatgggtgtaggtgaaccagggatgacaggtccagca
ggtccaccggggatgcaaggatctccaggatttcctggtgagggtctcccaggctccaat
ggtgacagggggtatgagggtcctaagggcagtcgtggacctccaggatttgggtacaaa
ggtgataagggaaacccaggatcccctggactttcaggtttggtggggtttccagggtca
ggcacacaaggggacaagggggaccaagggctcacagggccttctggacccaggggacct
cctggaattggtatagttggaccaaagggtgaccagggtttcccaggagaacctggacct
cagggaaagaggggtgatggtgaaccaggaccaaaggggaagccaggacctaatgggact
gcggggatacctggtattcctggtgaggatggagctgctggggctaagggagagatgggc
ttggtaggtctgcgaggatcagaaggagcacctgggaaaggtatctctggagaaaaggga
gatagaggtgaccgtggacagaggggactttcagggggcccaggccctagtggccccgcc
ggtgctaagggggaacctgggagcccaggaatgacaggccaacctggacctgctggtcgt
ggcattccaggaccaaagggagatcctgggcctgtgggaccaactggacctgtgggagaa
cctggaatgggaattattggcccaaagggtaataaaggaaatcctgggcctgtggggcca
ccagggatgaagggagatggagtcccaggaccacagggactgcctggtttaccgggagtg
caaggagagacaggagtcgatgggagaggactacctggatctaagggtgacagaggctta
cctggggtcacaggcccatcaggtcctccaggaactggactttatggaccgaagggttct
acagggcagcctggtccatcaggcgtccatgggcttccaggagagggcatccagggtcca
aagggagagcctgggtttcaagggccagtgggcccccgcggggcaccaggggacggcctc
ctaggggaaaagggtgatagaggcatttctggataccggggaaagaaaggagacaaggga
aactatggagaacccggatctgctggacgaaaggggagacctggagaaaaggggggacca
ggactgacaagagaagaggtcatcagaataataagagaaatctgtggctgtggtctgaag
tgcagagagagccctctggagctggtgtttgtgatcgacagctcggagagcgtgggacca
gaaaactttgagttggtgaaggactttatgaatggtcttattgaccggatgtcggtgagc
actgaggctagccacataggcgtggtgctctacagccacgtggaaatggtggtggctagt
ctgcagcggcagaccagtaaagaagacatcaaggctgccgtcaggaggatgccctacctg
ggcgagggcacctttaccggcagcgccatccaccgagccatccagctattccgggcttcg
cgacctggtgtgaggaaagtggctgtggttataactgacgggttggctgacccccgtgac
atcatgcagtttgaggaaacagccgcagaggcccactatgagggaattgagatgtttgtt
gtgggagtcatgaacaagactgaccctctgtatgaagatttccaggctgagatgaatgtt
attgcctctgatcctgatgcaaatcatgtctactttatagatgacttcaagagtcttcac
actctggaaagcgttattctaagtcgggtttgtgagcaggatgacacaatggcctttcta
ccgaactctatttttccagccgtggaaatcgacgctgacattccagacgctacccatttc
aaagagttctcagaggaagaaaacatacaacgggaacacacagtggaagcagtgacagcc
ccgactctgcagtcccctgagtcagagtggcctgatgagaacctggttgataacgaactg
ttggtggagccctggaacaggcttccagaactcacgtttggctctcctgctggcgctggg
gtgacctccatagagggccctcagtcacagactcaatggctgcttgatgccttgagcaca
caggctccaaccagcccttctcctccacacctgacagactcatcagttccagttggagga
tgcagtcagcctctggacccaggtccctgtcggcagtacggagtcaagtggtactatgac
cctgaggccaacgcctgtgcccagttctggtacggaggctgtgaggggaatgcaaacaac
tttgagactgaggccaagtgcagggattcctgcatatacacgtaa
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