Hippoglossus hippoglossus (Atlantic halibut): 117773250
Help
Entry
117773250 CDS
T07778
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117773250 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117773250 (exosc5)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117773250 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117773250
NCBI-ProteinID:
XP_034460885
LinkDB
All DBs
Position
13:complement(3439332..3441966)
Genome browser
AA seq
222 aa
AA seq
DB search
MAVMEARCSSNVMLREFACEQNFLSQPDGSASFVHGDTSVYAGVYGPAEVKVSKEIYDRA
TLEVVIQPKVGLPSVRERSQEQCVRETCEASLLLSLHPRSSLTLILQVLHDDGSLLSCLL
NAACMSLMDAGLPMSCLFCGVTCAIDADGQIITDPTAAQEKESRALMTFAIDSNKHNVLM
SSTKGSFSVNELQQCIAVSQKASEKLFQFYRDSVRRRYSKTL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgatggaggcgcgctgctcctcgaacgtgatgctgcgggagttcgcctgcgaa
cagaactttctgtctcaaccggacggatccgcgtccttcgtccacggagacacgagtgtg
tacgctggcgtctatggaccggctgaggtcaaagtcagcaaggagatctatgaccgggcg
actctggaggtggtgattcagcccaaagtgggacttccaagtgtaagggagcgatcacag
gagcagtgtgtgcgagaaacctgcgaggcgtctctgctcctgtcgcttcacccgcgctcc
tccctcacgctcattcttcaggtgctgcacgatgacggctcactcctgtcctgcttgttg
aatgcagcctgcatgtctctcatggacgcgggcctgccgatgagttgcctgttctgtgga
gtgacctgtgccattgacgcagacggtcaaatcatcacagaccccaccgccgctcaggaa
aaggaaagtcgagctttgatgaccttcgctatcgacagtaataaacacaatgtattgatg
tcctcaaccaaaggatcgttttcagttaacgagctgcagcagtgtatagcagtcagtcag
aaagcctccgagaagctgttccagttctacagggactctgtgaggcggcggtactccaaa
accctctga
DBGET
integrated database retrieval system
