Hippoglossus hippoglossus (Atlantic halibut): 117774453
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Entry
117774453 CDS
T07778
Symbol
sec24a
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117774453 (sec24a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117774453 (sec24a)
Membrane trafficking [BR:
hhip04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117774453 (sec24a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
117774453
NCBI-ProteinID:
XP_034462784
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All DBs
Position
14:10852088..10874379
Genome browser
AA seq
1165 aa
AA seq
DB search
MSTAGFNSQNGTGTGQAYANGPSQNPVAMQQLPGVSYGMTHQPIYNPMQSKAPAPPGPGL
YPSGAYQPIPPGSSYQPGQPPTSYPAPLGQPLLTRPQMGVPPSHTPPQSASPGPRPSLAR
ATPPPPAASSSSYYPNPQQLQPMAPSWQYNTAPPPMGPPTSTSTPPRGPVANHVNPSSSS
TVPPPPLSSAAYSSGPGMPPTSLQGYNQPGMAPPQMNPMASHTYHPSRPAYGPPTSGHPN
SGPPPTGLPPTGPPPTGLPPTGPPHSMKHTPLPTGPPVANVTPPPPRADAQCGATFNSTQ
SPTEPDCQQGDIECPGAVAGNGPQSSNSYNHVDNIMAGPPQHGPPGRHLGHYPSLPPGYQ
NTPAPHKSPSPMHPAMQSATQPYTQSSQAYQQPPGGPGPAQLSPSMAAMSLQSSTPEALR
VVNLLQERNLLPPSPTPPPTPCLPQDLQKINCNPEVFRSTLTSIPQTQSLLNKAKMPLGL
LLHPFKDLTQLPVVTSSTIVRCRSCRTYINPFVTFLDQRRWKCNLCYRVNDVPEEFMYNP
VSRSYGEPHKRPEVQNATIEFIAPSEYMLRPPQPAVYLFVLDVSHNAVETGYLNVFCQLL
LENINTLPGDSRTKVGFITFDSTIHFYNLQEGLSQPQMLIVSDIEDIFLPTPDSLLVNLN
ECKELVQDLLRSLPNLFQKTMETQSALGSALQAAFKLLSPTGGRMSVFQTQLPNLGVGAL
QSREDPNQRASAKDIQHLSPATDFYKKLALDCSGQQVAVDLFLLSAQYCDLASLGCISRY
SAGSVYYYPSYHHQHSPAQVERFQKDLKRYLTRKIGFEAVMRIRCTKGMSIHTFHGNFFV
RSTDLLSLPNVNPDAGFAVQMSIEENLDDMQAVSFQAALLYTSSKGERRIRVHTLCLPVV
NSLSDIFSGADVQAITGLLACMAVDRSVAASLGDARDAMTNAAIDSLSSYRQSVLTIQQP
GLLAPACLRLFPLYVLALLKQKAFRTGTSTRLDDRVFAMCQLKYQPLVYAMLMIHPSLYR
IDDLNDEGALNINERTIPQPRVQQLSVEKLSRDGAFLMDAGLVIYLWIGRNCHTNFLSQV
LGVPSYAAVPENLYMLPELDTAESQRTRAFIGWLRDQRPFFPSVHVIRDESQLKNSFMQN
MIEDRTESALSYYEFLLHIQQQISK
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggcggggttcaactctcagaatgggacggggacggggcaggcatatgcgaac
ggtccatcacagaatccagttgccatgcagcagctcccaggggtcagctatggcatgacc
caccaaccaatctacaatccaatgcagtccaaagctcccgcaccccccggccctggactt
tacccctctggggcatatcagcctattcccccaggcagctcctaccagcctggccaaccg
cccacttcctacccagctcccctaggccagccattgttgaccaggcctcaaatgggtgtt
cctccatcacatacccctcctcagtctgccagccctggtcccaggccgtcccttgcacgg
gccacaccgccccctcctgcagcatcctctagtagctactatccaaacccccagcagctg
cagcccatggctccatcatggcagtacaacacagctcccccaccaatggggccacccact
tccacaagcacgcctccccgaggccctgtggcaaatcacgtgaacccatcttcaagttca
acagtcccaccgccaccactgtcatcagcagcatacagctcaggccccgggatgccccct
accagcctgcaaggatataaccagccaggcatggctcctccacaaatgaatcccatggct
tcccacacataccatccaagcagacctgcctatgggcccccaacttcaggacacccaaat
tcaggacccccacccacaggactcccacctacaggcccaccacctacaggactcccacct
acaggcccaccacactccatgaaacatacaccacttcccactggacccccagtggccaat
gtcacacctcctccacccagagctgatgctcagtgcggggcgacttttaacagcactcag
tcccccactgagcccgactgccagcagggggatattgaatgtccaggagctgtggccggc
aatggtccccaatcatcaaacagctataatcatgttgacaacataatggctggtcctccc
cagcacggaccacctggtcggcacttgggccactacccctccctcccccctgggtaccag
aacacaccggctccacacaaatccccctcccccatgcaccctgcgatgcaaagcgccaca
cagccttacactcaatcatctcaggcataccagcagccacctggtggcccagggccagcc
caactgagcccgtccatggcggccatgagcctccagtccagtaccccagaggcactaaga
gtggtcaacctgctgcaggagaggaacctgctgccaccaagcccgacccctcccccgaca
ccctgcctgccccaggacctgcagaagattaactgcaacccagaggttttccgctctacg
ctgaccagcatccctcagacacagtcgttgctcaataaagccaagatgccgctgggcctg
ctgctccacccgttcaaagacctcacgcaacttcctgtggtgacttccagcaccatcgtc
agatgtcggtcctgcagaacctacattaacccgtttgtcaccttcctggaccagaggagg
tggaagtgcaacctgtgctatcgggtcaatgatgttccggaagagtttatgtacaaccca
gtcagcagatcgtatggagaaccacacaaaagacctgaggtccagaacgccaccattgag
ttcattgctccttcagagtatatgctgaggccaccgcagccggctgtttacctctttgtt
ctggacgtatcccacaatgcagtggagacaggctacctgaatgtgttctgtcagttgctg
ctggaaaacatcaacacgcttcctggagactcgcggacgaaggtaggcttcatcaccttc
gacagcaccatccacttctacaatcttcaggagggactttctcagcctcagatgctcatc
gtgtctgacattgaagatatctttttaccaacaccagacagccttctcgtaaacctcaat
gagtgcaaagaacttgtgcaggatctcctgaggagtctgccaaatttatttcaaaagact
atggagactcaatctgccctgggatcagctctgcaagcagccttcaagctgctgtcgccc
actggagggcgtatgtctgtctttcagacacaactgccaaacctgggtgtgggggcgctg
cagtccagagaggaccccaaccagcgagcgtctgccaaggacatccagcatctatctcca
gcgacagacttctacaagaagctggctctggactgctccggccagcaggtggctgttgac
ctgttcctgctcagtgctcagtactgtgatctggcttcacttggctgtatttcgagatac
tcagcagggagcgtttactattacccgtcataccaccaccagcacagccctgctcaggtg
gagcgcttccagaaggatctgaagagatacttaaccaggaagatcggctttgaggccgtc
atgaggatacgctgcactaaaggtatgtccatccacacgttccacggaaacttctttgtg
cgctcgacagatctgttgtccctccctaacgtgaacccggatgctggctttgctgttcaa
atgtccatcgaggaaaatctggacgacatgcaggctgtctctttccaggccgccctgctt
tacacctccagcaaaggagaaaggaggatccgtgtccacaccttgtgtctccctgtggtc
aactctctgtcagatatcttttctggggcagatgttcaggccattactgggctgctggct
tgcatggctgtggatcgttcagtggctgccagtctgggtgacgccagagatgcgatgacc
aacgctgctattgactcgctgtcgtcataccgacagtctgtgttgaccatccagcagccc
ggcctgctggccccggcctgcctcagactcttccccctttacgtcctcgccctgctcaaa
cagaaagccttcaggacgggcaccagcaccagactggatgaccgagtgtttgccatgtgt
caactgaagtaccagccactggtctacgccatgctgatgatccatccttctctgtaccgc
atcgacgacctgaacgatgagggagctttgaacatcaacgagcggaccatccctcagccc
agagtgcagcagctgtctgtggagaagctcagcagggatggagctttcctcatggacgct
ggattagtgatttatctgtggatcggacggaactgccacaccaacttcctctcacaagtc
ctgggagttcccagctatgctgccgtgcctgaaaacttgtatatgctcccggagctggac
actgccgagtcgcagagaaccagggctttcattggttggctgagggatcagaggccgttc
ttcccctctgtgcatgtcatcagggacgagagccagctgaaaaacagctttatgcagaac
atgatcgaggaccgaacagagtcggccctgtcgtactacgagttcctgcttcacatccaa
cagcaaatctccaaataa
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