KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117774867
Entry
117774867         CDS       T07778                                 
Symbol
aff4
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
  KO
K15185  AF4/FMR2 family member 4
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117774867 (aff4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hhip03021]
    117774867 (aff4)
Transcription machinery [BR:hhip03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117774867 (aff4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int LicD
Other DBs
NCBI-GeneID: 117774867
NCBI-ProteinID: XP_034463423
LinkDB
Position
14:complement(8227021..8256634)
AA seq 1170 aa
MLRRSAVESNMNREDRNVLRMKERERRNQEIQQGGGEAFPANSPLFPEPYKVSSKEDKLS
SRIQSMLGNYDEMKEPIGDTLPKLSSKPSNSSSSSEEKSGPPLFGDQRGVGSGGSSQTNK
WTPVGPAGGSSSQSQKRSGLQGGHGSQRNNGGSSSSSSQRHGGEVREKKSSKHSGGSEHS
KSHTSSPAKGSLSSSSSNSHSRSTLSAEQHHSKERYRSKSPRDREANWDSPSRVHTSFTS
GQHSSQAFPPSLMSKPGSMLQKPTAYVRPMDGQETAEPKSSQAESYSGQSHSSTMGEMKS
NGKASLSKLKMPSQPVEGSGDANCVDEILKEMTQSWPPPLTAIHTPCKTEPSKFPFPTKD
SHPFPGGHKRGSSSKSSSSHQSKTCDEQPTMLEDDLKLSSSEDSDVEQDSAKNASRNTSA
SNNSEGAEQSRDDSSSHSGSESSSGSDSESESSTTDSEANEPPRPASPEPEQPMANKWQL
DNWFKKAKQFSPASPVDNNSVPTKCKKEGRDNGSGRGYGSQGGGSKDSATPTPSRDLRAA
QKGAEGGRGRQKSPAQSEGGTNPRIRVGKKQPKKSEKPPVVEEPKGGLRVESEPAPEIPP
HRPKAATKGSRKPSIKKEPKSSPRPTAAAVTSTVDKRKPKAATKTSQKSREFVDTDSSSS
DSEGNESIPSSSQTPKYTDSIRTPVCVFSPMEEKELLSPLSDPEERYPARPPQQQVLLVK
IDLTLLSRIPGRPYKDPAEIKVERDDSLDRDSKDFSKQSSEKSSSKAKRKHKNDEEGAKT
ESKRCKLEEKSLSHHKNSSKESKRSLEKKEEPAPSPSMSGLQRTPKAEHPSRKRTVSQSS
TSLSSGTGSGKEGGHSTKGNSTSKHRKGEDKGRSTRDGKEKSSKGCDNQLAVPPLSTDGS
KSQRSKLVFEDRVHSADHYLQEAKKLKHNADALLDRFEKAVYYLDAVVSFVECGNALEKS
AQESKSPFPMYAETVELIKYTMKLKSYMAPDATSADRRLAVLCLRCQSLLYLRLFKLRKD
SALKYSKTLTEHLKNSLSNTQAPSPGMGNKAAGMPSPVSPKLSPGTAGGYSSVSSSSSAS
SSVTIPQRIHQMAASYVQVTSNFLYATEVWDQAEQLSKEQKGELKKIDFFLELDKVMGPL
IFNTSSMTELVRYTRQGLHWLRLDAKAIPQ
NT seq 3513 nt   +upstreamnt  +downstreamnt
atgctaaggcgctctgcggtcgaaagcaacatgaaccgtgaggaccggaatgtgctccga
atgaaagaaagagaaaggagaaatcaagaaatccagcagggaggaggagaggcttttcca
gcaaattcccctctcttccccgaaccctacaaagtgtccagcaaggaagataaactgtcc
agccgtattcagagcatgctgggcaattacgacgagatgaaagaaccgattggtgacaca
cttccaaagcttagcagtaaaccttcaaacagctcatcttcctccgaggagaagtcaggc
ccacctttgtttggggaccagcgtggcgtcggcagcggtggcagcagccagaccaataag
tggactcctgttggtccagcaggtggatcttcatcccagtcccagaaacgctcaggactc
cagggtgggcacggcagccagagaaacaacggaggcagtagcagcagcagtagccaaaga
cacggaggagaggtgcgtgaaaagaaatcaagtaaacacagcggaggatcagagcactca
aagtcacacacgtcaagtcccgccaagggctctctgagctcctccagcagcaacagccac
tcacggagcaccttgtccgccgagcagcaccacagcaaggagcgctaccgctctaagtcc
ccgcgagacagagaggccaactgggactcgccctcacgggttcacacctccttcactagt
ggacagcactcgagtcaggcctttcccccgtctctcatgtccaagcccggctccatgctg
cagaagcccacggcctatgtgcggcctatggacggccaggaaacggcagagcccaagagc
tcgcaagcggaaagctacagcggtcagtcgcacagcagcaccatgggagagatgaagtcc
aacggcaaggcctcgctttccaaactcaagatgccctcacagcctgtagagggctccggt
gatgccaactgtgtcgatgagattctgaaggaaatgactcagtcgtggccccctccgctg
acggccattcacaccccctgcaaaacagagccctccaagtttccattccctaccaaggac
tcacacccttttcctggtggacacaaacgaggcagttcttccaagagctccagcagtcac
cagtccaaaacttgcgatgaacagccaactatgctcgaagatgacctgaagctgagcagc
agcgaagatagtgatgtagaacaggactctgccaagaatgcctcaaggaacacatcagca
agcaataacagtgaaggagcggagcagtcgagggatgactccagcagccacagcggctcg
gaaagcagctcgggctcagacagcgagagcgaaagcagcacgacggacagcgaggccaac
gagcccccgcggcctgcctctcctgaacctgaacaacccatggccaacaagtggcagctg
gacaactggttcaagaaggccaagcagttctccccagcttctccagtggacaacaatagt
gttccaaccaagtgcaagaaagagggcagagataacggctcaggacgtggctatggtagc
cagggaggggggtctaaagactcagctacacccaccccaagtagagacttacgggcagca
caaaagggcgcggagggtggccgtggccggcaaaaatcccccgcccagagtgagggtggc
acgaatccgcgaatccgtgtaggtaaaaaacagcccaaaaaatcggagaagcctccagtg
gtagaggaacccaagggtggtctgagagtggagagtgagcccgccccagagattcctccc
catcggcccaaagctgctacaaagggttcccgcaaaccaagtatcaaaaaagaacccaag
tcctcaccgaggcccactgctgctgctgtcaccagcaccgtggacaaacgcaagccgaag
gcagccaccaagacttcccagaagtctcgtgagtttgttgatacggactcttcgtcgtcc
gactctgaggggaacgagagcatcccgtcatcgtcgcagacgcccaagtacacagacagc
atcaggaccccagtgtgtgtgttttctccaatggaagaaaaagagctgttgtctccactg
agtgaccctgaggagcgatatcctgcgaggccgcctcagcagcaggttctactcgtgaag
atagatctcactttgctgtcgaggatcccagggcggccctacaaggatcccgcagagata
aaagtggagcgggacgactctctagacagggacagcaaagacttcagtaagcagagctct
gagaagagctcgagcaaggccaagaggaaacacaagaacgacgaagaaggcgccaagacg
gagagcaagcgatgcaagctagaggagaagtctctatcccatcataaaaacagcagtaaa
gagtcgaagaggtctttggagaagaaagaggagccagccccctctccatccatgtcaggt
ctgcagcggacgcccaaagcagagcatccgagtcggaagaggacggtcagccagtcctcc
acctctttgtctagtgggacaggaagtggaaaggaggggggccacagcacgaagggcaac
tccacctccaagcacagaaaaggggaggacaagggacgcagcacacgcgatggcaaggag
aaatcctcaaagggctgtgataaccagctggctgtgcctccgctctccacagacggctcc
aagtctcagagatccaagctggtgtttgaggacagggtccattcagcagatcactactta
caagaagctaagaaacttaaacacaatgcagatgctctgttggaccgtttcgagaaggca
gtttactacctggacgccgtggtgtctttcgttgaatgtggtaacgctttggagaagagt
gcccaagagtccaagtctcccttccccatgtatgctgaaactgtggagcttatcaaatac
actatgaagttaaaaagctatatggccccagatgctacttcagcagaccggaggctagct
gtgctttgcttacgatgccagtccctcctgtacctgcggttattcaagctgaggaaagac
agtgcactcaaatactccaaaacactcacagagcacttaaagaactctctgagtaacacc
caggctccctctcctggaatgggaaataaggcagcgggtatgccctctccagtgtctccc
aaactgtccccgggcacggccggcggctactcgtcagtcagcagcagtagcagcgccagc
tcgtctgtgaccatacctcagcgtatccaccagatggccgccagctacgttcaggtcacc
tccaacttcctgtacgccactgaggtctgggaccaggctgagcaactttctaaggagcag
aaaggtgaacttaaaaaaatagactttttcctggagttggacaaggtgatgggtcctctt
atcttcaacaccagcagcatgacagaactggtgcgttacacacggcagggcctccactgg
ctgcgcctggacgcaaaggctattccccagtga

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