Hippoglossus hippoglossus (Atlantic halibut): 117776014
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Entry
117776014 CDS
T07778
Name
(RefSeq) methyl-CpG-binding domain protein 5-like isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117776014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117776014
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117776014
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
117776014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
PWWP
Motif
Other DBs
NCBI-GeneID:
117776014
NCBI-ProteinID:
XP_034465562
LinkDB
All DBs
Position
2:complement(3149050..3169981)
Genome browser
AA seq
1450 aa
AA seq
DB search
MNGGKDCEAGDERQAAPVQVPIGWQRKAERGRGVLYISPSGSVLSSLEQVKTYLLTDGTC
KCGLECPLILHKVFNFDPGAAVKQRTAEDVRADDDVTKLCIHKRKLLAVATLHKSMERHP
PLTLTSPGRGTSHVVAAHSTTQRAIRNKPHDGLSNAVGPDCKSHFKMMMAVGQQQHRLYS
PQEMGGAQQPELYSGYPRPQRLGSGEPCPKSPYRAGYIGMLSPPPSSAKLYGDGSQSPSA
DTLGSPEGFPRNNPCGFPGAGSPGSASIHGNTRMPLSPPSVMLHGSPASQPSCAMTGRTS
TPLSPTATAKSPVMNMNVPRGNFPPGMDMSRVAFHHKTQPPVHTVPPTPSIPPSCALQKR
QLTSEKDPLGILDPIPSKQVSQPPTNAPNPSNFQPNIHSQVPMMNVNIPPPAIVPLPSNL
PLPTAKPGHGGHVQRTQQGGPASSMSPSPVTSPVHMAGPAIGRMEASPHRSRSSSTSSDH
GNFAMPSGHQAPCGTMKVPPRSPRSAMGSPRPAMPSSPSTNKTDPLHQYKDSQLLPGMVN
SIGTQQHGNPMYSPTSSSSSSSSSLATPSASQKGHPGLLGMPLNQLLNQQNATSFPASSL
LSAAAKAQLANQNKLTAAGNSTTGMAGGGVGVAGMGAGGGGSGGSGGHPGSITGPRGMEG
HSTLNPMLPPNSAMLLNTPEGQSGRAALRDKLMAQQRDPMRKRKQSSGGAAVNHDNSNNM
VYNMLNKSGMGGPHMPGPSATEQLRKVGRLGNLPPNASMAQLLQSMSCQSSHNLTGSSHR
PGLSPGPGQGPQGAPQLHYNDSTVMVPAGPQHNLHAQQRLQGPGDAMQHCRNMDSSGGHL
GTRPGQFPDIMAQMQASSMSNCRPMGPGGGPVGPDGMPLGRPNTNPPPLSHPSPRPSQQN
LLHSMGRTNMVVMQHGGGDGGCTQSISDSGNPSSLGCGVGGLPPHVNRGQMYQQQVHQGM
QQVVASHPAYQGQQHFSDTTPYTEGNMVNAGSMACLYQNYQQGMLQHPQFGAGQQPQGEG
LPGTPGSDRGPGGGPESVDAIYRAVVDAASKGMHVTITTTVSGTTQASPVPALSAMSAFT
ASIGEPVNLPQAVSAVLHGHQEGEALPLHTRPRQVRPGRGQKNMDAGKMTPDGTPEATDY
FRSPGRGTPRGQWDGETQHRGGFDTHSNNSSWGGEEFLECSTQVRSSPCMERPASLAPAP
LCPTEDSNDHGLVMAHEKAFPDDGYRFNNCSRTPVNYKERLEQTVERCTHINGATPHFNT
RGYGDVLGPPRQELTGDDQSPSSSTSLEGPLATAKDYSHYNGHFNGMAPSPSDTKSLSSE
EDLRQPDSPSSELLHYRSRTFNMGDLVWGQLKGFPPWTAKLAGDEQVHSAAMQLREQAKV
EPEKLKTLTHDLEALDRAAKRGLNRPGKLNNHLEAAIHEAMSELDKMSGTIPSRDRQVKL
PKPKRRKISR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcggaaaggactgtgaggcaggagatgagaggcaggccgcccctgtccaggtc
cccattggctggcagcgcaaggcagagcgtggcagaggggtcctatacataagtcccagt
ggctcggtgctgtctagcttggagcaggtgaagacctacctgctgacagatggaacctgt
aaatgtggcctggagtgcccactcatccttcacaaggtgttcaacttcgacccaggggca
gctgtcaagcagaggacagcggaggacgtgagagcagatgacgatgtcaccaaactctgc
attcacaagaggaagcttctggccgtggccacgctgcacaagagcatggagaggcaccca
cctctgacactgaccagtccaggaagaggtacatcacatgtggttgccgcgcattccacg
actcaacgagcaataaggaataaaccccacgacggcctgtccaatgctgttggccctgac
tgcaagagtcatttcaagatgatgatggcagtaggacaacagcagcacaggctgtattca
ccccaggagatgggtggagcccagcagccggagctctactctgggtaccccaggccacag
aggctgggcagtggggagccatgccccaaatccccatacagggctgggtacataggcatg
ctgagcccacctccctccagtgcaaagctatatggagatggctcacagtctccaagtgca
gacactctgggcagccctgagggctttccaaggaacaatccttgtggttttccaggagct
ggcagtcccggctcagcctccatccatgggaatactaggatgcctctttccccacccagt
gtgatgctccatggctcccctgcgagccagccatcctgcgccatgacagggaggactagc
acgcccctctccccaacggccactgccaaaagccctgtcatgaacatgaacgtgccacgg
ggcaacttccccccaggtatggatatgtcccgtgtggcttttcaccataaaacacagccg
cctgtgcatacggtgccgcccaccccatccataccaccatcctgtgcccttcagaaaagg
cagttgacttccgaaaaagaccccttaggcatcttagaccctatccccagcaagcaagtc
agccagcctcccaccaacgccccaaacccctcaaacttccagcctaacatccactctcag
gtaccaatgatgaatgtaaacataccccctcctgccattgttcccttgccaagcaactta
cctttaccaacagcgaagcctgggcatggtggccatgttcagaggactcaacagggtggt
ccagcttcctccatgtccccctcccctgtcacttcccctgtccacatggctgggcctgcc
attgggagaatggaggcctcccctcatcgctcacgctcatcctccacctcctctgatcat
ggaaactttgcaatgccctctgggcaccaggccccatgtggcaccatgaaggtccctcct
cgttcccccaggtccgctatgggatctcccagaccggccatgccctccagcccctccacc
aacaaaacagacccactccaccagtacaaagactcccagctgttgcccgggatggtaaac
tctattggaacccagcagcatggtaaccccatgtattcacccacctcttcttcctcctca
tcatcctcctctctggcaacccctagcgcttcccagaagggccacccaggactcctgggg
atgcccctcaaccagctcctcaaccaacagaacgccacttccttccccgccagcagtctc
ttgtcagctgcagccaaagcacagctagcaaatcaaaacaaactcaccgctgctggcaac
agcactactggcatggctggtggtggagttggtgtcgcaggtatgggggcgggtggtgga
ggtagtggtgggagtggtgggcaccctggctctataaccggccctcgaggcatggaggga
cacagcactttaaatcccatgctcccgccaaactccgccatgctgctcaatactcctgag
ggccagagtggtcgggcagctctcagagacaaactcatggcccagcagagggaccccatg
cgcaaacggaagcagtcgtccggcggtgctgctgttaaccacgataacagtaacaacatg
gtctacaacatgcttaacaaatcaggcatgggtggaccccacatgccagggcccagtgcc
actgagcagctgcgaaaagtgggccgacttgggaaccttcccccaaacgcctccatggcc
cagcttctccagtccatgagctgccagagctcccataacttgactgggagcagccatcgt
ccaggtcttagccctggtccagggcagggtcctcaaggagctccacagctgcactacaac
gacagcacggtaatggtccctgctggccctcagcataatctgcatgctcagcagaggctg
cagggtccaggagatgcaatgcagcactgccggaacatggactcctctggaggccatctg
ggcacacgtccaggccagttccctgacataatggcccaaatgcaggcctcctccatgagt
aactgtcggccaatggggccaggtggtggaccagtgggccctgatggcatgccgctggga
cgccccaacaccaatcccccgccactatcccatcctagccctcgtccctcacagcagaac
ctccttcacagtatggggcggactaacatggtcgtgatgcaacatggagggggtgatgga
ggctgtacacagagcatttctgattcaggaaacccatcatcccttggctgtggtgtggga
ggcctgccaccacatgtgaacagaggtcagatgtaccagcagcaggtccaccagggcatg
cagcaggtggtggcctcccacccggcctaccagggccagcagcacttttctgacaccaca
ccctacacagaaggcaacatggtcaacgctggctccatggcctgcctctaccagaactac
cagcaggggatgttgcagcacccacagttcggggcggggcaacagccccagggagagggg
cttccaggtacacctggctctgacagggggcccggtggtggcccagagtcggtggacgcc
atctacagagctgtggtggacgccgccagcaagggcatgcatgttacgataacaaccacg
gtgagcgggaccacgcaggcgagtccggtgcctgccctcagcgccatgagtgccttcact
gcttctataggggagcctgtcaacctcccccaagcagttagtgcagtcctgcatgggcac
caggagggggaggcgttacccctgcacaccaggccgaggcaggtgaggccaggacggggt
cagaagaacatggatgctgggaagatgactccagacggtactcctgaggccactgactac
ttccgttctcctggccgtggtactccaagggggcagtgggacggggagacgcagcacagg
ggaggttttgacacgcacagcaataacagctcctggggcggcgaggaatttctagaatgt
tcaacccaagttaggagtagtccatgcatggagcgaccagccagtttggctcccgcccct
ctctgccccactgaggactccaacgatcatggcctggtcatggcccacgaaaaggccttt
cccgatgatggatatcgctttaataactgcagccggactcctgtaaactacaaggagcgt
ctcgagcagacagtggaacgctgcacccatatcaacggtgccaccccccatttcaacacc
cgcggttatggtgatgtcctaggtcccccacggcaggagttgacgggcgacgaccagtcg
cccagctcctccacgagcctggagggtcccctggccacagccaaagactacagccactac
aacggccacttcaacggtatggcgcccagcccctcggacacaaagagtctaagcagtgag
gaagacttgcggcagccagactctccctcctcagagctgcttcactaccgatccaggacc
ttcaacatgggggatctggtctggggacagctgaagggcttcccaccctggactgccaag
ctggccggggacgaacaagtgcacagcgctgctatgcagctgcgggagcaggcgaaggta
gagccagagaagctaaaaacactaactcacgacttggaggcacttgaccgagccgccaaa
cgaggcctgaacagaccggggaaactgaataatcacttggaagctgctatccacgaggcc
atgagtgagctggacaagatgtcaggcacgatcccatcgagggatcgccaggtgaagctc
ccgaagcccaagaggaggaaaatatccagataa
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integrated database retrieval system
