KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117778602
Entry
117778602         CDS       T07778                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04510  Focal adhesion
hhip04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117778602 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117778602 (lamc1)
SSDB
Motif
Pfam: Laminin_N Laminin_EGF Laminin_B Alanine_zipper Death
Other DBs
NCBI-GeneID: 117778602
NCBI-ProteinID: XP_034470214
LinkDB
Position
17:complement(24129899..24168894)
AA seq 1594 aa
MQSWIRAVVAWSWVAVCVRGAMDECSDEQGGPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGATGVTKSCHICDAQDPRNQHTAADLTDYNNQQDTTWWQSQTMLAGIQYPSSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSESGPWVPYQYYSGSCEKTYQKQSRGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNSGGRPVCNCKHNTEGDD
CNVCKPFYNDRPWRRATADNSNECLPCDCNGKSAECYFDAELYRATGHGGHCRNCADNTD
GPNCERCLDNYYRDQSSSRCLPCGCNSVGSESPQCDNRGMCACKPGVTGDKCDRCQPGYH
SLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKLGYFNLDPNNPQGCTPC
FCFQHSSVCDSAEGFSVHAVSSSFHRDDEQWTGQQRDGSSVSVQWSPSGQEISLISDDYF
PMYFVAPENFLGNQMLSYGQNLTLSFRVDRRDTRLSAEDLVLEGANLRVAVPLIAQGNAY
PNENMQTYVFRLHDSTDYPWRPTVSHSDFQKLLHNLTAVKIRGTYSERSAGYLDDVSLVT
ARRGPGVPARWVEQCTCPQGYQGQHCEQCTLGYRRALPELGAFSSCEPCNCNGHSDACDP
ATGACACLHNTAGLSCERCKDGFYGEATQGTTDDCQPCPCPAGATCAVVPKTREVVCTNC
PAGTTGKRCELCDDGFFGDPLGQNGPVRACRACKCSDNIDPNAVGNCNRETGECLKCIYN
TDGFFCDRCKEGFYGNALATNPTDKCKPCSCSAFGTVGRQTSCSQVTGQCPCLSNVAERD
CSACEPGFFNLQSSSGCERCNCNPIGSTNGQCDIATGQCECQPGITGLHCERCEVDFFGF
SSSGCKPCDCDPEGSQSGQCKEDGRCECRPGFVGARCDMCEENYFYNRSVPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSGQETVSDKAFEDRLKEAERAIMDLLDEAQTSKGV
DRGLLDRLNTINNTLTTQWNRLQNIRSTVDDTGAQADRARGRVRDAENLIDRARQELDKA
RDAVSKVDIKPPGGAGEPNNMTLLAEEARRLAEKHKMDADQIEKIAKDANDTSTKAYNLL
LKTLDGESKTSQEVDELNKKYNEAKELAKNLEKQANKVQAEAEDAGNKALKIFANLTSLP
PFDTKALEDEATKIKKEASDLDKLIDKTEKEYNDLRDDLKAKEQEVRKLLEKGKSEQQTA
DQLLARADAAKALAEEAARKGQSTYREAEGILNDLRDFDKRVNDNKTAAEDAMKKIPAIN
ATIMAANEKTRQAESALGNAAADAREAKNKAEEAERIASNVQKGSAKTKQDAEKAFQDTN
KLDAEVDNMMDELSAAEQELARKKAEADQDMMMAGMASNNAKEAEDNARKAKGAVKTVLS
TITALLDQLGNIDKVDLSKLNQIDESLKRAKGKMADSDLDRKLTELNDVARTQEEMITDY
DRQIREIRADITNLNDIKNTLPDGCFNTPSLERP
NT seq 4785 nt   +upstreamnt  +downstreamnt
atgcagagctggatccgggctgtggtggcctggagctgggtggcggtgtgtgtccgcggc
gccatggacgagtgttcggacgaacagggcggaccgcagcgctgcatgcccgagttcgtt
aacgccgcgtttaacgtgacggtggtggcgaccaacacctgcggctccccgcccgaggag
tactgcgtccagaccggagccaccggggtcaccaagtcctgccacatctgcgacgcccag
gacccgcggaaccagcacacagccgcggacctgaccgactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcggggatccagtacccgagctccatcaacctc
accctgcacctcggtaaagccttcgacatcacctacgtgcgcctcaagttccacaccagc
cgaccggagagcttcgccatatacaagcggaccagcgagagcggcccctgggtgccttac
cagtactacagcggctcctgcgagaaaacctaccagaagcagagccggggcttcatccgg
accggcgaggacgagcagcaggcgctctgcaccgacgacttcagcgacatctctccgctc
accggtgggaacgtggccttctccacgctggaggggcgacccagtgcctacaactttgac
aacagccccgtcctccaggactgggtgacggccaccgacatcagagtgaccctgaacagg
ctcaacacgttcggagacgaggtcttcaatgaccccaaggtcctcaagtcctactactac
gccatctctgacttcgctgtgggaggaaggtgtaagtgtaatggccacgccagcgagtgt
gtgaagaacagcggaggacggccggtgtgcaactgcaaacacaacacggagggtgacgac
tgcaatgtctgcaaaccgttctacaacgaccgtccgtggaggagagcgaccgccgacaac
tccaacgagtgtctgccctgcgactgtaacgggaagagcgcagagtgttacttcgatgct
gagctgtaccgagccacgggtcatggaggtcactgcagaaactgcgccgacaacaccgac
ggccccaactgtgagcgctgcctggacaactactacagagaccagagcagcagccgctgt
ttgccctgcggctgcaactctgtaggctcggagtctcctcagtgcgacaacagaggaatg
tgtgcgtgtaaaccaggagtgacgggagataagtgtgaccgctgtcagccgggttaccac
agtctgacggaggccggctgcaggccctgttcttgctcgccctctggcagcactcaggag
tgtgacgtcaacacgggacagtgtcgctgcaaagacaacgtggagggcttcagctgcgac
aggtgcaaactgggttacttcaacctggatcccaacaaccctcagggctgcacgccgtgc
ttctgcttccagcactcgtctgtgtgcgacagcgccgaaggcttcagcgtgcacgccgtc
agctcctccttccacagagatgacgaacagtggaccggtcagcagcgtgatgggtcaagt
gtctctgtccagtggtctcccagcggacaggaaatctccctcatctcagacgactacttc
cccatgtattttgtagccccagagaacttcctggggaaccagatgctaagttacggacag
aacctgactctgagtttccgggtcgaccgacgggacactcgtctgtcggcagaggacctc
gttctggagggcgctaatctgagagtggccgttcccctgatcgcccagggcaacgcctac
cccaatgagaacatgcagacatacgtgttcaggctccatgacagcacagattacccctgg
agaccgaccgtcagtcactcggacttccagaaacttcttcacaatttgacggccgtcaag
atccgaggcacctacagtgaacggagtgctggttaccttgacgacgtctccttggtaaca
gcgaggcggggcccaggtgtgccggcccgctgggtggagcagtgcacctgtcctcagggt
taccagggtcaacactgtgagcagtgcactctgggataccgccgcgcccttccagagctc
ggcgccttcagctcctgtgaaccctgcaactgtaacgggcacagcgacgcctgcgacccc
gccacaggagcgtgcgcctgtctgcacaacacggccggtttgagctgtgagcgctgtaaa
gacggcttctatggcgaagccacccaggggacgacggatgactgccagccgtgtccctgc
cccgccggagccacctgcgccgttgttcccaaaaccagagaggtggtctgcactaactgt
cccgccggaaccacaggtaagcgctgcgagctctgcgacgacggtttcttcggagacccg
ctgggccagaacggcccggttcgagcctgccgagcctgcaagtgcagcgacaacatcgac
cccaacgccgtcggcaactgcaaccgcgaaaccggagaatgcctgaagtgcatctacaac
accgatggcttcttctgcgaccgctgcaaggagggtttctatggcaacgccctggccacc
aaccccacggacaagtgcaaaccctgctcctgttctgcgttcgggacggtgggtcgacag
accagctgctctcaggtcaccggtcaatgtccgtgtctctctaacgtcgccgagcgtgac
tgcagcgcctgcgagcccggcttcttcaacctgcagagctccagcggctgcgagcggtgt
aactgtaacccgattggctccaccaacggtcagtgtgacatcgccacaggccagtgcgag
tgtcagcccggcatcacagggctgcactgcgagcgctgcgaggtcgacttcttcggcttc
agctcgtccggttgcaaaccatgtgactgcgaccctgagggctctcagtcgggtcagtgt
aaagaggacggacgctgcgagtgtcgtccgggcttcgttggagctcgatgtgacatgtgt
gaggagaattacttctacaaccgctcggtgccgggctgccagcagtgtccttcctgctat
agtctggtcagagacaaggtgaaccagcagaggcagaagcttcacgacttgcagactctg
atcgataacctcggctcaggtcaggagacggtcagcgacaaggcgtttgaggaccgactg
aaggaggcagagcgagccatcatggatctgctggacgaggctcagaccagcaaaggcgtg
gacagaggtctgctggatcgactgaacaccatcaacaatactctgaccactcagtggaac
cgactgcagaacatccgcagcacggtggacgacaccggcgctcaggctgaccgcgcccgc
ggccgagtccgagacgcagagaacctgattgaccgagcccggcaggagctggacaaggcc
agggacgccgtcagcaaagtggacatcaaaccgcccggcggcgccggagagcccaacaac
atgacgctgctcgctgaggaggcacgtagactcgccgagaagcacaagatggacgctgat
cagatcgagaagatcgccaaagacgccaacgacacgtctacgaaggcgtacaacctgttg
ctgaagactctggacggagagagcaagacgagccaggaagttgacgagctcaacaagaag
tacaacgaggcaaaggagctggcgaagaatctggagaaacaggccaacaaggttcaggcc
gaggccgaggacgccggaaacaaggccctgaagatcttcgccaacctaaccagcctcccg
cccttcgacaccaaggctctggaggatgaagctacaaagatcaagaaggaggcgtcggac
ctggacaagctgatcgataagacggagaaggagtacaacgacctgagagacgacctgaag
gccaaggagcaggaagtccgcaaactgctggagaaagggaagagtgagcagcagaccgca
gatcagctgttggctcgggctgacgccgccaaagctctggctgaggaggcggcgaggaag
ggtcagtccacgtatagagaggcagagggaatcctgaacgacctccgagacttcgacaag
agggtcaacgacaacaagaccgctgctgaggacgccatgaagaagatccccgccatcaat
gccaccatcatggccgctaacgagaagaccaggcaggcggagtcggccctcggcaacgcc
gccgccgacgcacgagaggccaagaacaaggcggaggaggccgagaggatcgccagcaac
gtgcagaagggctccgccaagaccaagcaggacgcagagaaggcgttccaggacaccaac
aagctggacgccgaggtcgacaacatgatggatgaactgagcgctgctgaacaggagctc
gccaggaagaaggccgaggccgaccaggacatgatgatggcaggaatggcgtccaacaac
gccaaggaggcagaggacaacgcccgaaaggccaagggcgctgtgaagacggtcctgagc
accatcaccgccctgctggatcagctgggaaacatcgacaaggtcgacctgagcaaactg
aaccaaattgatgagtcgttgaagagggccaagggcaagatggccgacagcgacctggac
aggaagctgacagaacttaacgacgtggcgcggacccaggaggagatgatcactgattac
gacaggcagatccgcgagatccgcgccgacatcaccaacctcaacgacatcaagaacacg
ttacctgacggctgcttcaacacgccatctctggagaggccgtaa

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