Hippoglossus hippoglossus (Atlantic halibut): 117778602
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Entry
117778602 CDS
T07778
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04510
Focal adhesion
hhip04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117778602 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117778602 (lamc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Alanine_zipper
Death
Motif
Other DBs
NCBI-GeneID:
117778602
NCBI-ProteinID:
XP_034470214
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All DBs
Position
17:complement(24129899..24168894)
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AA seq
1594 aa
AA seq
DB search
MQSWIRAVVAWSWVAVCVRGAMDECSDEQGGPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGATGVTKSCHICDAQDPRNQHTAADLTDYNNQQDTTWWQSQTMLAGIQYPSSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSESGPWVPYQYYSGSCEKTYQKQSRGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNSGGRPVCNCKHNTEGDD
CNVCKPFYNDRPWRRATADNSNECLPCDCNGKSAECYFDAELYRATGHGGHCRNCADNTD
GPNCERCLDNYYRDQSSSRCLPCGCNSVGSESPQCDNRGMCACKPGVTGDKCDRCQPGYH
SLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKLGYFNLDPNNPQGCTPC
FCFQHSSVCDSAEGFSVHAVSSSFHRDDEQWTGQQRDGSSVSVQWSPSGQEISLISDDYF
PMYFVAPENFLGNQMLSYGQNLTLSFRVDRRDTRLSAEDLVLEGANLRVAVPLIAQGNAY
PNENMQTYVFRLHDSTDYPWRPTVSHSDFQKLLHNLTAVKIRGTYSERSAGYLDDVSLVT
ARRGPGVPARWVEQCTCPQGYQGQHCEQCTLGYRRALPELGAFSSCEPCNCNGHSDACDP
ATGACACLHNTAGLSCERCKDGFYGEATQGTTDDCQPCPCPAGATCAVVPKTREVVCTNC
PAGTTGKRCELCDDGFFGDPLGQNGPVRACRACKCSDNIDPNAVGNCNRETGECLKCIYN
TDGFFCDRCKEGFYGNALATNPTDKCKPCSCSAFGTVGRQTSCSQVTGQCPCLSNVAERD
CSACEPGFFNLQSSSGCERCNCNPIGSTNGQCDIATGQCECQPGITGLHCERCEVDFFGF
SSSGCKPCDCDPEGSQSGQCKEDGRCECRPGFVGARCDMCEENYFYNRSVPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSGQETVSDKAFEDRLKEAERAIMDLLDEAQTSKGV
DRGLLDRLNTINNTLTTQWNRLQNIRSTVDDTGAQADRARGRVRDAENLIDRARQELDKA
RDAVSKVDIKPPGGAGEPNNMTLLAEEARRLAEKHKMDADQIEKIAKDANDTSTKAYNLL
LKTLDGESKTSQEVDELNKKYNEAKELAKNLEKQANKVQAEAEDAGNKALKIFANLTSLP
PFDTKALEDEATKIKKEASDLDKLIDKTEKEYNDLRDDLKAKEQEVRKLLEKGKSEQQTA
DQLLARADAAKALAEEAARKGQSTYREAEGILNDLRDFDKRVNDNKTAAEDAMKKIPAIN
ATIMAANEKTRQAESALGNAAADAREAKNKAEEAERIASNVQKGSAKTKQDAEKAFQDTN
KLDAEVDNMMDELSAAEQELARKKAEADQDMMMAGMASNNAKEAEDNARKAKGAVKTVLS
TITALLDQLGNIDKVDLSKLNQIDESLKRAKGKMADSDLDRKLTELNDVARTQEEMITDY
DRQIREIRADITNLNDIKNTLPDGCFNTPSLERP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctggatccgggctgtggtggcctggagctgggtggcggtgtgtgtccgcggc
gccatggacgagtgttcggacgaacagggcggaccgcagcgctgcatgcccgagttcgtt
aacgccgcgtttaacgtgacggtggtggcgaccaacacctgcggctccccgcccgaggag
tactgcgtccagaccggagccaccggggtcaccaagtcctgccacatctgcgacgcccag
gacccgcggaaccagcacacagccgcggacctgaccgactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcggggatccagtacccgagctccatcaacctc
accctgcacctcggtaaagccttcgacatcacctacgtgcgcctcaagttccacaccagc
cgaccggagagcttcgccatatacaagcggaccagcgagagcggcccctgggtgccttac
cagtactacagcggctcctgcgagaaaacctaccagaagcagagccggggcttcatccgg
accggcgaggacgagcagcaggcgctctgcaccgacgacttcagcgacatctctccgctc
accggtgggaacgtggccttctccacgctggaggggcgacccagtgcctacaactttgac
aacagccccgtcctccaggactgggtgacggccaccgacatcagagtgaccctgaacagg
ctcaacacgttcggagacgaggtcttcaatgaccccaaggtcctcaagtcctactactac
gccatctctgacttcgctgtgggaggaaggtgtaagtgtaatggccacgccagcgagtgt
gtgaagaacagcggaggacggccggtgtgcaactgcaaacacaacacggagggtgacgac
tgcaatgtctgcaaaccgttctacaacgaccgtccgtggaggagagcgaccgccgacaac
tccaacgagtgtctgccctgcgactgtaacgggaagagcgcagagtgttacttcgatgct
gagctgtaccgagccacgggtcatggaggtcactgcagaaactgcgccgacaacaccgac
ggccccaactgtgagcgctgcctggacaactactacagagaccagagcagcagccgctgt
ttgccctgcggctgcaactctgtaggctcggagtctcctcagtgcgacaacagaggaatg
tgtgcgtgtaaaccaggagtgacgggagataagtgtgaccgctgtcagccgggttaccac
agtctgacggaggccggctgcaggccctgttcttgctcgccctctggcagcactcaggag
tgtgacgtcaacacgggacagtgtcgctgcaaagacaacgtggagggcttcagctgcgac
aggtgcaaactgggttacttcaacctggatcccaacaaccctcagggctgcacgccgtgc
ttctgcttccagcactcgtctgtgtgcgacagcgccgaaggcttcagcgtgcacgccgtc
agctcctccttccacagagatgacgaacagtggaccggtcagcagcgtgatgggtcaagt
gtctctgtccagtggtctcccagcggacaggaaatctccctcatctcagacgactacttc
cccatgtattttgtagccccagagaacttcctggggaaccagatgctaagttacggacag
aacctgactctgagtttccgggtcgaccgacgggacactcgtctgtcggcagaggacctc
gttctggagggcgctaatctgagagtggccgttcccctgatcgcccagggcaacgcctac
cccaatgagaacatgcagacatacgtgttcaggctccatgacagcacagattacccctgg
agaccgaccgtcagtcactcggacttccagaaacttcttcacaatttgacggccgtcaag
atccgaggcacctacagtgaacggagtgctggttaccttgacgacgtctccttggtaaca
gcgaggcggggcccaggtgtgccggcccgctgggtggagcagtgcacctgtcctcagggt
taccagggtcaacactgtgagcagtgcactctgggataccgccgcgcccttccagagctc
ggcgccttcagctcctgtgaaccctgcaactgtaacgggcacagcgacgcctgcgacccc
gccacaggagcgtgcgcctgtctgcacaacacggccggtttgagctgtgagcgctgtaaa
gacggcttctatggcgaagccacccaggggacgacggatgactgccagccgtgtccctgc
cccgccggagccacctgcgccgttgttcccaaaaccagagaggtggtctgcactaactgt
cccgccggaaccacaggtaagcgctgcgagctctgcgacgacggtttcttcggagacccg
ctgggccagaacggcccggttcgagcctgccgagcctgcaagtgcagcgacaacatcgac
cccaacgccgtcggcaactgcaaccgcgaaaccggagaatgcctgaagtgcatctacaac
accgatggcttcttctgcgaccgctgcaaggagggtttctatggcaacgccctggccacc
aaccccacggacaagtgcaaaccctgctcctgttctgcgttcgggacggtgggtcgacag
accagctgctctcaggtcaccggtcaatgtccgtgtctctctaacgtcgccgagcgtgac
tgcagcgcctgcgagcccggcttcttcaacctgcagagctccagcggctgcgagcggtgt
aactgtaacccgattggctccaccaacggtcagtgtgacatcgccacaggccagtgcgag
tgtcagcccggcatcacagggctgcactgcgagcgctgcgaggtcgacttcttcggcttc
agctcgtccggttgcaaaccatgtgactgcgaccctgagggctctcagtcgggtcagtgt
aaagaggacggacgctgcgagtgtcgtccgggcttcgttggagctcgatgtgacatgtgt
gaggagaattacttctacaaccgctcggtgccgggctgccagcagtgtccttcctgctat
agtctggtcagagacaaggtgaaccagcagaggcagaagcttcacgacttgcagactctg
atcgataacctcggctcaggtcaggagacggtcagcgacaaggcgtttgaggaccgactg
aaggaggcagagcgagccatcatggatctgctggacgaggctcagaccagcaaaggcgtg
gacagaggtctgctggatcgactgaacaccatcaacaatactctgaccactcagtggaac
cgactgcagaacatccgcagcacggtggacgacaccggcgctcaggctgaccgcgcccgc
ggccgagtccgagacgcagagaacctgattgaccgagcccggcaggagctggacaaggcc
agggacgccgtcagcaaagtggacatcaaaccgcccggcggcgccggagagcccaacaac
atgacgctgctcgctgaggaggcacgtagactcgccgagaagcacaagatggacgctgat
cagatcgagaagatcgccaaagacgccaacgacacgtctacgaaggcgtacaacctgttg
ctgaagactctggacggagagagcaagacgagccaggaagttgacgagctcaacaagaag
tacaacgaggcaaaggagctggcgaagaatctggagaaacaggccaacaaggttcaggcc
gaggccgaggacgccggaaacaaggccctgaagatcttcgccaacctaaccagcctcccg
cccttcgacaccaaggctctggaggatgaagctacaaagatcaagaaggaggcgtcggac
ctggacaagctgatcgataagacggagaaggagtacaacgacctgagagacgacctgaag
gccaaggagcaggaagtccgcaaactgctggagaaagggaagagtgagcagcagaccgca
gatcagctgttggctcgggctgacgccgccaaagctctggctgaggaggcggcgaggaag
ggtcagtccacgtatagagaggcagagggaatcctgaacgacctccgagacttcgacaag
agggtcaacgacaacaagaccgctgctgaggacgccatgaagaagatccccgccatcaat
gccaccatcatggccgctaacgagaagaccaggcaggcggagtcggccctcggcaacgcc
gccgccgacgcacgagaggccaagaacaaggcggaggaggccgagaggatcgccagcaac
gtgcagaagggctccgccaagaccaagcaggacgcagagaaggcgttccaggacaccaac
aagctggacgccgaggtcgacaacatgatggatgaactgagcgctgctgaacaggagctc
gccaggaagaaggccgaggccgaccaggacatgatgatggcaggaatggcgtccaacaac
gccaaggaggcagaggacaacgcccgaaaggccaagggcgctgtgaagacggtcctgagc
accatcaccgccctgctggatcagctgggaaacatcgacaaggtcgacctgagcaaactg
aaccaaattgatgagtcgttgaagagggccaagggcaagatggccgacagcgacctggac
aggaagctgacagaacttaacgacgtggcgcggacccaggaggagatgatcactgattac
gacaggcagatccgcgagatccgcgccgacatcaccaacctcaacgacatcaagaacacg
ttacctgacggctgcttcaacacgccatctctggagaggccgtaa
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