Hippoglossus hippoglossus (Atlantic halibut): 117779276
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Entry
117779276 CDS
T07778
Symbol
nrxn2b
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin 2b
KO
K07377
neurexin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117779276 (nrxn2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117779276 (nrxn2b)
Membrane trafficking [BR:
hhip04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117779276 (nrxn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
117779276
NCBI-ProteinID:
XP_034471211
LinkDB
All DBs
Position
18:complement(3562020..4179716)
Genome browser
AA seq
1652 aa
AA seq
DB search
MTRGLRFLCWPLWPLALLSLLSTVTMLEFGGAPGQWARYGRWEAGSVGELSFSLKTNISK
ALVLYLDDGGNCDFLELLIAGGRLQLRFAIHCAEPATLHMETGVNDDRWHMVLLTRNFRE
TLLMVDGETKVAEVKSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFQGLISNLK
VGEMPPTLLNSQGIQSDLEYLCTKQNPCFNGGFCSIQYGEVHCDCTHTRFKGKYCKEAEE
YAVEGLAHLTLNDQGDSSQAGKEESVATFKGNEFFCYDLSMTPIQSSTDEITLSFRTLQR
NGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLR
QHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGC
LKDVVYKNNDFKLELSRLAIERDPKITLNGDLVFRCEDVAALDPVTFETPESFISLPKWN
TKKTGSISFDFRTTEPSGLLLFSHGRPPSPKEQKPGRELKTDYFAMELLDGYMYLLIDMG
SGKTKLKASNKKVNDGEWCHVDFQREGRKGSISVNSRSMPFSSPEGSEILDLDSDMFLGG
LPESKSDLILPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSALGVSSFCTRELQ
KRCSSTPCGNGGLCKEGWNRYICDCTSTGYLGTNCEIEATVLSYDGSMYLKIIMPVTMHT
EAEDVVLRFMSQRAYGLLMASTSKESADTLRLELDGGRVKLTVNLDCIRIDCSLSKGPEI
LFAGQKLNDNEWHAVKVVRRGKILQLSVDNVTVEGQMTGAHTRLEFHNLETGIMTERRFI
SVVPSNFIGHLQGLTFNGLPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKGSYLAL
ATLQAYASMHLFFQFKTTTPDGLMLFNSGDGSDFIVVELVKGYVHYVFDLGNGPSLMKGN
SDKPLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVTKNMYSN
LPKLIASRDGYQGCLASVDLNGRLPDLIADALHRVGQVERGCDGPSTTCTEESCYHQGVC
LQQWEGFTCDCTMTSYGGSFCNDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFST
QLKEAILVRVESAKGLGDYLELHIERGKIGVIFNVGTDDIIIEESAVMVSDGKYHVVRFT
RSGGNATLQVDSQPVIERFPSGRQLTIFNSQAFIKIGGGGETGRHFQGQISGLYYNGLQV
LKLAAESDPNVQTQGNLRLVGDVPSVLTTDTTSTTPLADMSTTIMETTTTMATTTTRKQR
SPTMRDSVTQNADDILVASAECPSDDEDLEECEPGNGGELVLPIITVDSLDPPSIATHYP
VIPPPPTTYRPFLTLLETTKESLPLPNGRPPCPLDQEDCEETIEVSAYGSGEMTESDDED
YYKNSPLVTDRTVLPPPPAAEGGVQNPRDRHFSRSPNSHRPPLSSTPTANPDQLSPRIKP
AAGGSSSSNNIPAGKMNTRDQVLLPPAHPSSDPGHRRVPGITYPPNFPHVPTPDPTSPER
GLPGAVEVQQSSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDQSRNYISNSA
TQSNGALVKEKQPSTAKTVTKNKKNKDKEYYV
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgacaagggggctaagattcctgtgttggcccctgtggcctctggccctcctcagccta
ctcagtacagtgacgatgctggaatttggtggggcgcctggtcaatgggcacgctatgga
cgctgggaagccggatcagtgggcgagctgagcttcagcctcaagaccaacattagcaaa
gccttggtactctacctggacgatggcggcaactgtgacttcttggagctgctgattgct
ggcgggcgcctccagctgcgctttgccatccactgcgccgagccggccactttgcacatg
gagacaggagtgaatgatgaccgctggcacatggtcttgctcacccgcaactttcgcgag
accctcctgatggtcgacggtgaaacaaaagtggctgaggtcaagtccaagaggaaggag
atggcggtggtcagtgacctgtttgtaggcggcatccctcccgatgtgcgcctctctgcg
ttgacgtccagtacagtaaagtacgagccacccttccagggcttgatctccaatctgaag
gtcggggagatgcctcctactttgttaaatagccagggcattcagagcgacctggagtac
ctctgcaccaaacagaacccgtgcttcaatggagggttttgctctattcagtatggagaa
gttcactgtgactgcacccacacccgcttcaaggggaagtactgcaaggaagctgaagag
tatgctgttgaaggtctggcgcacctgacgttaaacgaccaaggtgactcatctcaagcc
ggtaaggaagagtcggtggccaccttcaagggcaacgagttcttctgctacgacctgtcg
atgacgcccatccagagcagcaccgacgagatcacgctgtccttccgcacgctgcaacgc
aacggcctcatgctgcacaccgggaagtcggccgactacgtgaacctctccttgaagagc
ggagccgtgtggctggtcatcaacctgggctcgggggcctttgaggccctggtggagccc
gtcaacggcaagttcaacgacaatgcctggcatgacgtgcgcgtcacccgcaacctgcgc
cagcacgcaggcattggacacgctatggtgaccatctcagtggatggtatattgaccacc
actggttacacccaggaggattacaccatgttaggctctgacgacttcttctacatcgga
gggagccccaacaccgctgacctgcccggatcgccagtcagcaacaacttcatgggctgc
cttaaagatgtggtgtacaagaacaacgattttaagctggagctgtcacggctggccatc
gagcgcgaccctaagatcaccctgaacggtgacctggtgttccgctgcgaggacgtggca
gccctagaccccgtcaccttcgagacccccgagtccttcatctccttgcccaagtggaac
accaagaagacgggctccatctcctttgacttccgcacgacggagcccagcggcctcctg
ctcttcagccacggccgtcctccgagtcccaaagagcagaagcccggtcgggagctgaag
acagattactttgccatggagctgctggacgggtatatgtacctgctgatcgatatgggc
tccgggaaaacaaagctgaaggccagcaacaagaaggtcaatgatggtgaatggtgccat
gtggatttccagagggaaggaaggaaaggatctatctcagtaaacagccgcagcatgccc
ttcagctccccagagggcagtgaaatcctggacctggacagtgatatgttcctgggcggg
ctgccggagtctaagtcagacctcatcctgccgccagaggtttggacagcgctgctgaac
tacggctacgtgggctgcgtccgcgatctctttatcgacggcaagagccgcgacgtccgc
cgactggctgagatacagagtgcgttgggtgtgagcagtttctgcacgcgggagcttcag
aagcgctgcagcagtactccgtgtggcaatggaggtctgtgcaaagagggttggaaccgc
tacatatgtgattgtaccagcaccggatacctgggcaccaactgtgagatagaggcgacg
gtgctgagttacgatggcagtatgtacctgaagatcatcatgccggtcaccatgcacacg
gaggccgaggatgtggtgctgcgcttcatgtctcagcgggcttacggcctgcttatggcc
tccacctccaaggagtcggcagacaccctgcgcctggagctggacggaggccgagtcaag
ctcaccgtgaacctcgattgtatcaggatagactgtagcctcagcaaaggaccggagata
ctgtttgcggggcagaagctgaacgacaacgagtggcacgcggtgaaggtggtgcgaaga
ggcaagatcctgcagctgtctgtggataatgtcacagtggaaggccagatgactggtgcc
cacacacgtctcgagttccacaacctcgagacgggcatcatgactgagcgtcgcttcata
tctgtggtgccctcaaacttcattggccatctccagggcctgaccttcaatgggctgcca
tatctagaccagtgtaaaaacggcgacatctcctactgcgagctgaacgcccgcttcggc
atgcgccacatcattgcagatccggtgacgtttcgaacgaaaggcagctacttagcgtta
gcaacgttacaagcttacgcctccatgcacctcttctttcagttcaaaaccaccacgccc
gatggcctgatgcttttcaactctggagacgggagtgacttcatcgttgtggagctggtg
aaagggtatgtccactacgtctttgaccttggcaacgggccgtcgctgatgaagggcaac
tcagacaagccgctcaatgacaaccagtggcacaacgtggtggtctcccgggacgccaac
aacgtgcatacgctaaagatcgactcacgcaccgttactcagcactccaatggagcccgg
aacctggacctcaaaggggagctgtacatcggtggcgtgacgaagaacatgtacagcaat
ctgcccaagctcattgcgtcccgggatgggtaccaaggttgtctggcctccgtggacctg
aatgggagactccccgacctgatcgcagatgccctccacagggtgggtcaggtggaacga
ggctgcgacggacccagtaccacctgtacggaggagtcttgctaccatcagggggtgtgt
ctccagcagtgggagggcttcacctgcgactgcacgatgacgtcctatggtggctcattc
tgcaatgaccctgggacaacttacatcttcgggcgaggcggagccctcatcacatatacc
tggccacccaatgaccggccgagcacacgggcagaccggctggcagtgggcttcagcacg
cagctgaaggaagccattctggtcagggtagagagtgccaagggactgggagattacctg
gagctgcacatagaacggggaaagatcggcgtgatcttcaacgtgggaacggacgacata
atcatcgaggagagcgcggtgatggtgagcgacggcaaataccatgtggtgcgtttcaca
cgcagtggtggcaatgccacactacaggtggacagccagcccgtcatcgaacgtttcccc
tcaggtcgccagttgaccatcttcaacagccaggcgttcatcaaaattggtggcggtgga
gagacggggcgccacttccagggccagatctcaggtctgtactacaatggcctgcaggtg
ctcaaactggcagcagagagcgaccccaatgtccagacccagggtaacctgcggctggtg
ggtgacgtgccctcagtgctcaccactgacaccacctccaccaccccgctggctgacatg
tccaccacaatcatggaaacaaccacaaccatggctacaaccacaacccgcaaacagcgc
tcgcccaccatgagggacagtgtgacacagaatgcggatgacattttggtagcatcagct
gagtgtcctagcgatgacgaagatttggaggagtgtgagcctggaaatggaggtgaatta
gtgttgccaataataacggtggactccctagaccccccatccatcgccacccactaccca
gtaatccccccgcccccaaccacctatcgccctttcctcaccctgctcgaaaccaccaaa
gagtccctccccttgcccaacggccggcccccatgccccctggaccaggaggactgcgag
gagaccatcgaagtgtcggcatacggctcgggggagatgacggagtctgatgacgaggac
tattacaaaaactcgcccctggttaccgacaggactgtgctccctcctcccccggccgcc
gagggtggcgtccagaacccccgcgaccgccatttctcccgctctcccaactcacaccgc
ccacctctctcctccacccccacggccaaccccgaccaactcagcccgcgcatcaagccg
gctgctggcggcagcagtagtagcaacaacatccctgctgggaaaatgaacacccgggac
caagtgctgctgccgccagcccacccctcttcagacccgggccaccgtagagtccctgga
ataacctaccccccaaatttccctcatgttcccactccagatcccacgtctcctgagaga
gggctcccaggcgctgtggaggtgcagcagtccagcagcaccacaggaatggtggtaggc
atcgtggcagccgctgcactctgcatcctcatcctgctctacgccatgtacaagtaccgc
aaccgcgacgagggctcctaccaggtggaccagagccgcaactacatcagtaactcagcc
acgcagagcaacggcgccctggtgaaggagaaacagcccagcactgccaagacggtcacc
aagaacaagaaaaacaaagacaaagagtactacgtctga
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