Hydrogenobaculum sp. HO: HydHO_1599
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Entry
HydHO_1599 CDS
T02482
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hho
Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hho03032
]
HydHO_1599
03400 DNA repair and recombination proteins [BR:
hho03400
]
HydHO_1599
Enzymes [BR:
hho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HydHO_1599
DNA replication proteins [BR:
hho03032
]
Prokaryotic type
DNA Topoisomerases
HydHO_1599
DNA repair and recombination proteins [BR:
hho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HydHO_1599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AGG15901
UniProt:
M1RFI2
LinkDB
All DBs
Position
complement(1531563..1533923)
Genome browser
AA seq
786 aa
AA seq
DB search
MQEYGADAIKVVTGLEHVRLRPSMYIGDISERGLHHLIWEIVDNSVDEAMAGYATHIRVH
IHQDDSVTVEDNGRGIPVYIHKDVGKPAVEVVLTVLGAGGKFDKKAYQYSGGLHGVGASV
VNALSEWLIVEVYRDGKIYRQEYERGVPKTELQIMGDTTKRGTKITFKPDAEIFETTKIK
FDIVEKRIRELAYLNKNVTFEIIDDRLNKHLVYKFEKGIIELVEYLAEGKEPLFDDVIYI
ESGKDGTLVEIAFKYTKDYKESLESFVNNIKTIEGGTHVTGFRSGLSKVVSKLSQNIKIS
KELKEMFTGEDLREGLVAVVSCKVPEPQFEGQTKTKLGNQETKNIVESITVEFLTDYFEK
HQDILKLIVEKAIEAALAREAAKKAKDLVRRKSFLEDTSLPGKLADCSEKDPSKCEIFIV
EGESAGGSAKQGRDRRFQAILPLKGKILNVEKARIDKALSNEEIRAIISALGCNIGEDID
LSALRYHKTIIMTDADVDGSHIRTLLLTFFYRFMTKLIENGHVYIAQPPLYKVKIGKKET
YIKDDKELEKFLLNIIRTDLSITDAKSNTYRGDVLINMLNTIKEQHNTIAQILNKRNKDV
ITYLLSNKIDESYLKDEQKAKKLLEDIQSMKSVSSAKLKYDDFDGSYSIVIYDIYQNFSI
IDIDFLTSGTYKKLFEEHKEFFNYPISLKLGHKVKNIEKPVEDLYQDIINFVKDGIEIQR
YKGLGEMNPEQLWETTMNPNTRRLLRVSLEDAAEADRIFSILMGENVEPRREFIETYAKE
VRNLDV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaatacggcgcagatgcaataaaagttgttaccggattagaacacgtaagatta
cgcccctcaatgtatataggggatatctccgaaagaggacttcatcaccttatatgggaa
atagtagataactctgttgacgaagcgatggcaggctatgccacacacataagagtgcat
atacaccaagatgattctgtaacggtagaagataatggcagaggtatacctgtttacatc
cataaagacgtaggaaaaccagcggtagaagtggttttaacagtgcttggggctggtgga
aagtttgataaaaaagcttatcaatattcagggggacttcacggtgtaggcgcttccgtt
gtaaacgcactttcagaatggctcatagtagaagtttacagagacggcaagatatacaga
caagagtatgaaagaggagttccaaaaactgagcttcaaataatgggagataccacaaaa
agaggcacaaagattacatttaaaccggacgctgaaatatttgaaaccacaaaaataaag
tttgacatagtagaaaaaagaataagggaattagcttaccttaataaaaacgtaaccttt
gagataatagacgacaggttaaacaaacatcttgtttataaatttgaaaaaggcatcata
gagctggtagaataccttgcagaaggcaaagaaccccttttcgacgacgtaatctatata
gaatctggaaaagatggtactttggtagaaattgcctttaaatatacaaaagattacaaa
gaatctttagaaagctttgtaaacaacataaaaaccatagaaggtggcactcacgtcaca
ggttttagaagtggattgtcaaaggttgtatcaaaactatcccaaaacataaaaatatca
aaagagttaaaagagatgtttaccggtgaagacctaagagagggtcttgtggccgttgta
tcttgtaaagtaccagagcctcagtttgaaggtcaaaccaaaacaaagcttggcaaccaa
gaaacaaaaaacatagtagaatcaataacggtagaatttttaacagattattttgaaaaa
caccaagatattttaaaacttatagtagaaaaagctatagaagcagcgctagcaagagaa
gctgctaaaaaagccaaagatttggtaagaagaaaatcattcttagaagatacatcttta
ccgggtaaacttgccgattgctctgaaaaagacccatcgaaatgtgaaatttttatagta
gagggagaatcagcgggtggttctgcaaaacaaggaagagacagaagattccaagcgata
ttaccactaaagggtaaaatactaaatgtagaaaaagcaagaatagacaaagccctttcc
aatgaagaaataagagcaattatatcagcattaggttgtaacataggagaagatatagat
ctaagcgctcttagatatcacaaaaccataatcatgacagacgctgatgtagatggttct
cacataaggactcttcttcttacttttttctatagatttatgacaaaacttattgaaaat
gggcatgtgtatatagcacaaccacccctttacaaagtaaagatagggaaaaaagaaacc
tacataaaggacgataaagagttagaaaaatttttactaaacatcataagaacagactta
tctataacagacgccaaatcaaacacctacagaggtgatgtactaataaacatgttaaat
actataaaggaacagcacaacaccatagctcaaatactaaacaaaagaaacaaagatgta
ataacatatcttctgtcaaataaaatagatgaaagttatctcaaagatgagcaaaaagcc
aaaaaactcttagaagatatacagtctatgaaaagcgtaagcagtgctaaattaaaatac
gatgattttgatggctcttactctatagttatatacgatatctatcaaaactttagcatt
atagatatagattttcttacttctggtacctacaaaaagctctttgaagagcataaagaa
ttttttaactatcctataagcctaaaacttgggcataaggttaaaaatatagaaaaacca
gtagaagatctttatcaagacataataaattttgtaaaagatggcatagagatacagcga
tacaaaggtcttggtgaaatgaacccagaacagctatgggaaaccaccatgaatccaaac
accagaaggcttttaagggtatccttagaagatgcggcagaagcagatagaatattctct
atactgatgggcgaaaacgtagaaccaaggcgtgagtttatagagacctacgccaaggag
gtaagaaacttagatgtttaa
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