KEGG   Helicobacter pylori Shi112: HPSH112_04435
Entry
HPSH112_04435     CDS       T02037                                 
Name
(GenBank) cag pathogenicity island protein (cag4)
  KO
K12089  cag pathogenicity island protein 4
Organism
hhp  Helicobacter pylori Shi112
Module
hhp_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hhp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhp02044]
    HPSH112_04435
Secretion system [BR:hhp02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPSH112_04435
SSDB
Motif
Pfam: SLT DUF4322 TED_complement
Other DBs
NCBI-ProteinID: AFI01088
LinkDB
Position
complement(897939..898448)
AA seq 169 aa
MFEKWIGLTLLLNSLAYPCQKVTISFKQYENLIHIHQKGCDNEVVCRTLISIALLESSLG
LNNKREISLKDTSYSMFHITLNTAKKFYPTYSKTLLKYKLLNDVDFAISLAKRILKENFD
YYKQKHPNKSVYQIVEMAVGAYNGGMKHNPNGAYVKRFRCIYSQVRYNG
NT seq 510 nt   +upstreamnt  +downstreamnt
ttgtttgagaaatggattggtctgactttacttcttaattccttagcctatccatgccaa
aaagtaaccattagtttcaagcagtatgaaaatcttatccatattcaccaaaaaggctgc
gacaatgaagtggtgtgcagaacgctcatctctatcgccttattggaaagttctttaggg
ttgaacaacaagcgcgaaatttccctaaaagacacttcctattccatgtttcacatcact
ttgaacaccgctaaaaaattctaccccacctattctaaaacgcttctcaaatacaaattg
ctcaatgatgtggattttgcgatttcgttggctaaaagaattttgaaagaaaattttgat
tactacaaacaaaaacaccctaataaaagcgtgtatcaaatagtagaaatggcagtaggc
gcttacaatgggggaatgaaacacaaccctaatggcgcttacgtgaagagatttcgttgc
atttattctcaggtgcgatataacgggtag

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