Helicobacter pylori Shi112: HPSH112_04775
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Entry
HPSH112_04775 CDS
T02037
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp00240
Pyrimidine metabolism
hhp00250
Alanine, aspartate and glutamate metabolism
hhp01100
Metabolic pathways
hhp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HPSH112_04775 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HPSH112_04775 (carB)
Enzymes [BR:
hhp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HPSH112_04775 (carB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp_4
RimK
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
AFI01154
LinkDB
All DBs
Position
complement(971499..974756)
Genome browser
AA seq
1085 aa
AA seq
DB search
MPKRTDISNILLIGSGPIVIGQACEFDYSGTQSCKTLKSLGYRVILINSNPATVMTDPEF
SHQTYIQPITPENIAAIIKKEKIDAILPTMGGQTALNAVMQMHQKGMLEGVELLGAKIEA
IKKGEDRQAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAGGGSGVA
YNIEEFQELAKNALDASPINEILIEESLLGWKEYEMEVIRDNKDNCIIVCCIENIDPMGV
HTGDSLTIAPSLTLTDKEYQRMRDASFAILREIGVDTGGSNVQFAIHPETLRMVVIEMNP
RVSRSSALASKATGFPIAKVATMLAVGFSLDEIQNDITNTPASFEPSLDYIVVKIPRFAF
EKFAGVSSTLGTSMKSIGEVMAIGGNFLEALQKALCSLENNWLGFESLSKDLEMIKKEIR
RPNFKRLLYIADAFRLGVCVDEVFELCQIDRWFLSQIQKLVKAEESINSSVLTDAKKLRG
LKNLGFSDARIAAKIKENENLEVSPFEVELARMNLQIAPHFEEVDTCAAEFLSLTPYLYS
TYAPNPFPPIENKQEKQEKKILIIGSGPNRIGQGIEFDYCCVHASFALKDLNIKSVMLNC
NPETVSTDYDTSDTLYFEPIHFECVKSIIQRERVDGIIVHFGGQTPLKLAKDLAKMQAPI
IGTPFKVIDVAEDREKFSLFLKELDIKQPENGMAKSVDEAYSIANVIGFPIIVRPSYVLG
GQHMQILENIEELRHYLESVTHALEVSPKNPLLIDKFLEKAVELDVDAICDRKEVYIAGI
LQHIEEAGIHSGDSACFIPSTLSPKILDEIERVSAKIALHLGVVGLLNIQFAVHDNTLYL
IEVNPRASRTVPFLSKALGVPLAKVATRVMVLKDLKEALKFYDKKNIVGYSKGVYKPKMP
HFVALKEAVFPFNKLYGSDLILGPEMKSTGEVMGIARSLGLAFFKAQTACFNPIKNKGLI
FVSIKDKDKEEACVLMKRLVQLGFELCATEGTHKALEKAGVESLKVLKISEGRPNVMDLM
MNGEISMAINTSDHKSQDDAKLIRASVLKNHVSYFTTLSAIEVLILALEESSKEDELLAL
QDYLK
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgcaccgatatttccaacattctactgataggctcaggccctattgtgatc
gggcaagcttgtgagtttgactactcagggactcaaagttgtaaaaccttaaaatcttta
ggttatagagtgatcttaatcaattctaacccggccaccgtgatgactgaccctgaattt
tctcatcaaacttatatccaacccatcaccccagaaaatatcgccgctatcatcaaaaaa
gaaaagattgacgctattttacccacaatgggcgggcaaaccgctttgaatgcggtcatg
caaatgcaccaaaagggcatgttagaaggcgtggagcttttaggggctaagattgaagcg
attaaaaaaggcgaagacaggcaggctttcaaagaagcgatgttaaaaatcgggatggat
ttgcctaaagggcgttacgcttatagcgaattagaagccctagaagccattaatgaaatt
ggctttccagccattattagagcgagtttcactctggctggtggggggagtggggtcgct
tacaatattgaagagtttcaagaattggctaaaaacgccctggacgcttcgcccattaat
gaaattttgattgaagagtccttattggggtggaaagaatatgaaatggaagtcatacga
gataataaggataattgcatcattgtgtgctgtattgaaaatattgaccccatgggcgtt
cataccggcgatagcctcaccatcgctccaagcttaaccttaaccgataaagaataccaa
cgcatgcgcgatgcgagctttgcgattttaagagaaattggcgtggatacgggcgggagc
aacgtgcagtttgctatccacccagagactttaagaatggtcgtgattgaaatgaacccg
cgagtgagccgcagctccgcattagcttcaaaagcgaccgggtttcccattgcaaaagtg
gctaccatgcttgcggtgggttttagcttagatgaaatccaaaacgatattaccaacacc
ccggcgagttttgagcctagtttagattatatcgtggtgaaaatccctcgctttgcgttt
gaaaaatttgccggtgtttctagcactttagggacttctatgaaaagcattggcgaagtg
atggcgataggggggaatttcttagaagccttacaaaaagcgttatgctctttggaaaac
aattggctagggtttgaatcgttaagcaaagatttagaaatgataaaaaaggaaatccgc
cggccgaatttcaagcgcttgctttatatcgctgatgcgttcaggcttggcgtttgtgtt
gatgaagtgtttgaattatgccagattgacaggtggtttttatctcaaatccaaaagcta
gtcaaagcagaagaaagcatcaattctagcgttttaacggacgccaaaaaattaagaggg
cttaaaaatttaggctttagcgatgctaggattgccgctaaaatcaaagaaaatgaaaat
ttagaagtgagtccttttgaagtggaattagccagaatgaatttgcaaatcgcaccccat
tttgaagaggtggatacttgcgcggcggagtttttatcgctcacgccttatttgtattcc
acctatgcccctaacccttttccccctattgaaaacaaacaagaaaaacaagaaaagaaa
atcctaatcataggctctgggcctaatcgcatcggtcaaggcattgaatttgattattgt
tgcgtgcatgcgagctttgctttaaaagatttaaacatcaaaagcgtcatgctcaattgc
aatccagaaactgttagcacggattatgatacaagcgatacgctctattttgaacccatt
cattttgagtgcgtgaagagcatcattcaaagggagcgagtggatggcattatcgtgcat
tttgggggacaaacccctttaaaactcgctaaagatctagctaaaatgcaagcccccatt
attggcacgccttttaaggtgattgatgttgcagaagacagggaaaaattttccctcttt
ttaaaagagcttgacatcaagcagcctgaaaatggcatggctaagagtgttgatgaagcc
tatagcatcgctaatgtgattggtttccctattatcgtgcgccctagttatgtgctaggc
ggccaacacatgcaaattttagaaaatattgaagaattgcgccattatttagaaagcgtt
acgcatgctttagaggttagccctaaaaatccgctcctcattgataagtttttagaaaaa
gcggtggaactagatgtggatgctatttgcgatagaaaagaggtctatattgccggcatt
ttacagcacattgaagaagccggaatccattcaggcgattcggcgtgctttatcccttcc
actttaagccctaaaattttagatgaaattgagcgggtgagcgcgaaaatcgctctgcat
ttaggcgtagtagggctattgaatatccaatttgctgtgcatgacaacacgctctatttg
attgaagtcaatcccagagccagccgaaccgtgccttttttaagcaaggctttaggcgtt
cctttagcgaaagtagcgactagggttatggtgttaaaagatttgaaagaagccttgaag
ttctatgataaaaaaaatatcgtgggatattctaaaggcgtttataagcctaaaatgcct
cattttgtggctttaaaagaagcggttttcccttttaataaactttatggatcggatttg
attttggggcctgaaatgaaaagcaccggcgaagtgatggggattgctagatctttaggg
ttggcttttttcaaggctcaaacggcttgctttaaccccattaaaaacaaggggcttatt
tttgtttctattaaggataaggataaagaagaagcatgcgttttaatgaagcgcttggtt
cagttaggctttgaattgtgcgctacagaaggcacgcataaggctttggaaaaagccggg
gtggagtctttaaaagtgcttaaaatctccgaaggccgccccaatgtcatggatttaatg
atgaatggggaaatcagcatggctatcaacaccagcgatcacaaatctcaagatgacgcc
aaactcattcgcgcttctgtgcttaaaaaccatgtgagttatttcacgactttaagcgcg
atagaagttttgattttagcgttagaagaaagctctaaagaagacgagttgctagcccta
caagattatttaaagtag
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integrated database retrieval system
