Helicobacter pylori Shi112: HPSH112_04885
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Entry
HPSH112_04885 CDS
T02037
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp00470
D-Amino acid metabolism
hhp01100
Metabolic pathways
hhp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPSH112_04885
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HPSH112_04885
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhp01011
]
HPSH112_04885
Enzymes [BR:
hhp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HPSH112_04885
Peptidoglycan biosynthesis and degradation proteins [BR:
hhp01011
]
Precursor biosynthesis
Racemase
HPSH112_04885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
ZapC_N
Motif
Other DBs
NCBI-ProteinID:
AFI01176
LinkDB
All DBs
Position
complement(1000039..1001172)
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AA seq
377 aa
AA seq
DB search
MLKRASFVEVNTASLRHNFSAAKSIVPKDAHIMAVVKANAYGVGAIKASEIFLQEGAHYL
GVATLDEALELRSYFSKTPILILGYSPNSNASMLIDNDLSTMIFSLEQAEVFSQMALKSQ
KRLKIHLKIDTGMHRLGLEPNFKSIETIKKIRALKGLEIEGIFTHLSNADSNIKTHAKNQ
MKAFNAFLEQLSNQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMK
KSCPTILKNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGN
RIQVAINNQLAPLIGKVCMDQCFVKLNNIQAKEGDEVILFGDKSAKANDASEIATLLNTI
PYETISTLSKRLERVYI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagggcgagttttgtagaagtgaataccgcttctttaaggcataattttagc
gcagccaaaagcatcgtccctaaagacgcccacatcatggcggttgtcaaggcgaacgct
tatggggtgggagccataaaagcgagcgaaattttcttacaagaaggggcacattatcta
ggggtagcgactttagatgaagctttagagttgcgctcttatttttctaaaacccccatt
ttgattttaggctatagccctaattctaacgcttccatgctgattgataacgatttgagc
actatgatttttagccttgaacaagcggaagttttttctcaaatggctttaaaatctcaa
aaacgcttaaaaatccatctcaaaattgataccggcatgcaccgcttgggattagaacct
aattttaaaagcatagaaaccattaaaaaaatccgcgctttaaaaggcttggaaatagag
gggatattcacgcatttaagcaacgctgattccaacattaaaacccatgctaaaaaccaa
atgaaagcctttaacgcttttttagagcagctttcaaatcaaaaaatagagtttcaatac
cgccatgcttacaattccgccggcatcctttctttgtgtaacgggaatgaaaatcgtttg
ttaaacctctatcgcccaggaatcatgctctatggtttttacccttctaatgaaatgaaa
aaatcatgcccaaccattttaaaaaatgttatcagtttaaaagctcaaatcgttcaaatc
agaagcgttaaaaaaggcgaatttattggctatggcgagcacttttataccaatgaagaa
actttagtgggtgttttagctctagggtatgcagacgggttaatgcgcgctttaggcaat
cgcattcaagtagcgatcaataaccagttagccccccttattggcaaggtgtgcatggat
cagtgctttgtcaagctcaataatattcaagccaaagagggcgatgaggtcatcttgttt
ggggataaaagcgctaaggctaatgacgcaagcgaaatcgctacgcttttaaacaccatt
ccttatgaaaccatcagcactctatccaaacgcttggagcgcgtctatatttaa
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