Helicobacter pylori Shi417: HPSH417_02075
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Entry
HPSH417_02075 CDS
T02039
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr02020
Two-component system
hhr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HPSH417_02075 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HPSH417_02075 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhr03021
]
HPSH417_02075 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hhr02035
]
HPSH417_02075 (fliA)
Transcription machinery [BR:
hhr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPSH417_02075 (fliA)
Bacterial motility proteins [BR:
hhr02035
]
Flagellar system
Flagellar assembly proteins
Stator
HPSH417_02075 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
MarR
MarR_2
KORA
TetR_C_44
DUF4202
HTH_34
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AFH97568
LinkDB
All DBs
Position
409657..410433
Genome browser
AA seq
258 aa
AA seq
DB search
MILMMENRMPKEIQKTQTSETSEKNIEKVLNAYDKQQHHHQDALAIQYLPAVRAMAFRLK
ERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRS
NRKLIKSIDIEITKHLNEHGKEPSDAYLAEVLGENIEKIKEAKTASDIYALVPIDEQFNA
IEQDEITKKIEAEELLEHVQKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQ
IIKEVIKKVRKSLGVDHG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatgatggaaaatagaatgcccaaagaaattcaaaaaactcaaacaagcgaa
acaagcgaaaaaaatatagaaaaagttttgaacgcctatgataagcagcaacaccaccat
caagacgcgctcgctatccagtatttacccgccgtgcgcgctatggcgtttcgtttgaaa
gagcgcttgcccagttctattgattttaacgatctggtttctattggcactgaagaattg
atcaaattagccaggcgttatgagagcgcgttaaacgattctttttgggggtatgctaaa
actcgtgtcaatggggcgatgttagattatttgcgctctttagatgtgatttctcgctcc
aacagaaagctgattaaaagcattgatattgaaatcaccaaacaccttaatgagcatggg
aaagagcctagcgatgcgtatttagcggaagttttaggcgaaaatattgaaaaaatcaaa
gaagccaaaacggcttcagatatttatgcgttagtgccaatagatgaacaattcaatgcg
attgagcaagatgaaatcactaaaaaaattgaagcagaagagttgttagagcatgtccaa
aaagcgctgaatcaaatgagcgaaagagagcaaatccttatccagctttattactttgaa
gagttgaatttgagcgagattaaagagattttaggcatcactgaatcgcgcatttctcaa
atcattaaagaagtgattaaaaaggtgcgtaaatccttaggagtggatcatggctga
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integrated database retrieval system
