KEGG   Helicobacter pylori Shi417: HPSH417_02490
Entry
HPSH417_02490     CDS       T02039                                 
Name
(GenBank) cag pathogenicity island protein (cag4)
  KO
K12089  cag pathogenicity island protein 4
Organism
hhr  Helicobacter pylori Shi417
Module
hhr_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhr02044]
    HPSH417_02490
Secretion system [BR:hhr02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPSH417_02490
SSDB
Motif
Pfam: SLT DUF4322 TED_complement
Other DBs
NCBI-ProteinID: AFH97651
LinkDB
Position
498048..498557
AA seq 169 aa
MFEKWIGLTLLLNSLAYPCQKVTISFKQYENLIHIHQKGCDNEVVCRTLISIALLESSLG
LNNKREISLKDTSYSMFHITLNTAKKFYPTYSKTLLKYKLLNDVDFAILLAKRILKENFD
YYKQKHPNKSVYQLVEMAVGAYNGGMKHNPNGAYVKRFRCIYSQVRYNG
NT seq 510 nt   +upstreamnt  +downstreamnt
ttgtttgagaaatggattggtctgactttacttcttaattccttagcctatccatgccaa
aaagtaaccattagtttcaagcagtatgagaatcttatccatattcaccaaaaaggctgc
gacaatgaagtggtgtgcagaacgctcatctctatcgctttattggaaagttctttaggg
ttgaacaacaagcgcgaaatttccctaaaagacacttcctattccatgtttcacatcacc
ttgaacaccgctaaaaaattctaccccacctattctaaaacgcttctcaaatacaaattg
ctcaatgatgtggattttgcgattttgttggctaaaagaattttgaaagaaaattttgat
tattataaacaaaaacaccctaataaaagcgtgtatcaattagtagaaatggcagtaggc
gcttacaatgggggaatgaaacacaaccctaatggtgcttatgtaaagagatttcgttgc
atttattctcaggtgcgatataatgggtag

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