Helicobacter pylori Shi417: HPSH417_04585
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Entry
HPSH417_04585 CDS
T02039
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr00470
D-Amino acid metabolism
hhr01100
Metabolic pathways
hhr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPSH417_04585
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HPSH417_04585
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhr01011
]
HPSH417_04585
Enzymes [BR:
hhr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HPSH417_04585
Peptidoglycan biosynthesis and degradation proteins [BR:
hhr01011
]
Precursor biosynthesis
Racemase
HPSH417_04585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AFH98052
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All DBs
Position
complement(942996..944129)
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AA seq
377 aa
AA seq
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MLKRASFVEVNTASLRHNFSAVKSIVPKDAHIMAVVKANAYGVGAIKASEIFLQEGANYL
GVATLDEALELRSYFSKTPILILGYSPNSNASMLIDNDLSAMIFSLEQAEVFSQTALKSQ
KRLKVHLKIDTGMHRLGLEPNFKSIEIIKKIRALKGLEMEGIFTHLSNADAKIKTHAKNQ
MKAFNAFLEQLLNQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNGMK
ETCPTILKNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGN
RIQVAINNQLAPLIGKVCMDQCFVKLNNIQAKEGDEVILFGDKSAKANDASEIAALLNTI
PYETISTLSKRLERVYI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagggcgagttttgtagaagtgaataccgcttctttaaggcataattttagc
gcagtcaaaagcattgtccctaaagacgcccacatcatggcggttgtcaaggcgaacgct
tatggggtgggagccataaaagcgagcgaaattttcttacaagaaggggctaattatcta
ggagtagcgactttagatgaagctttagagttgcgctcttatttttctaaaacccccatt
ttgattttaggctatagccctaattctaacgcttccatgctgattgataacgatttgagc
gctatgatttttagccttgaacaagcggaagttttttctcaaacggctttaaagtctcaa
aaacgcttaaaagtgcatctcaaaattgataccggcatgcaccgcttgggattagaacct
aattttaaaagcatagaaatcattaaaaaaatccgcgctttaaaaggcttggagatggag
gggatattcacgcatttaagcaacgctgacgctaagattaaaacccatgctaaaaaccaa
atgaaagcctttaacgcttttttagaacagcttttaaatcaaaaaatagagtttcaatac
cgccatgcttacaattccgccggtatcctttctttgtgtaacgggaatgaaaatcgcttc
ttaaacctctatcgcccaggaatcatgctctatggtttttacccttctaatggaatgaaa
gaaacatgcccaaccattttaaaaaatgttatcagtttaaaagctcaaatcgttcaaatc
agaagcgttaaaaaaggcgaatttattggctatggcgagcatttttacacgaatgaagaa
actttagtgggtgttttagctctagggtatgcggacgggttaatgcgcgctttaggcaat
cgcattcaagtagcgatcaataaccaattagccccccttattggcaaggtgtgcatggat
caatgctttgtcaagctcaataatattcaagccaaagagggcgatgaggtcatcttgttt
ggggataaaagcgctaaggctaacgatgcaagcgaaatcgctgcacttttaaacaccatt
ccttatgaaaccatcagcaccctatccaaacgcttggaacgcgtctatatttaa
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