Helicobacter pylori Shi417: HPSH417_04820
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Entry
HPSH417_04820 CDS
T02039
Name
(GenBank) hypothetical protein
Organism
hhr
Helicobacter pylori Shi417
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
Viral_helicase1
AAA_23
DEAD
nSTAND3
SLFN-g3_helicase
NTPase_1
PhoH
UvrD_C_2
AAA_16
AAA
ABC_tran
AAA_18
ResIII
AAA_22
AAA_5
T2SSE
RNA_helicase
bpMoxR
cobW
AAA_28
NACHT
AAA_33
MMR_HSR1
Mg_chelatase
AAA_29
Cnd1_N
Motif
Other DBs
NCBI-ProteinID:
AFH98099
LinkDB
All DBs
Position
complement(997629..1000910)
Genome browser
AA seq
1093 aa
AA seq
DB search
MLSFIKEDSTIKAYNLNITKLEPKDREKSGLLKIEENKIYFHLDEKRYLELEIIGKAKEK
EIKNAFCSNAFLVAQVLNLSKNQERQVLELKCYFFKRPIKILPEALNINFKDTIVEKLLK
DMRKDENLENFKETCILKMAGLTYFVCVLPYEDENKENKENKENKENKENKENKENKENK
ENKENSEEILEEDFRLLNTKGELSVKHALINNRHSYEAISLRPIKQEQLAPGLCLFFQGS
LEFNDKTIKTMRTSLLVQIQQDEKSYLKIWEKYLIKSAQKSFNEAKEVGVLKIESVEKEG
ENLKIRFKPALDKNKMEILKKKSQLKEGSDLGVLEDLDTQNEESLINFISKQNKQTPPNN
SEITIKDISGDDFIIDYNPSIKEGDAFYLDYTGDLNTLIKQYSALDKTKKGLSANPNLGL
ILNIKENKEDSDGDNDAADAIDEVLKEILSSYKAKALGLTKRVKEKVFKNDPTENQEKAI
NIALNTPDIAIIQGPPGTGKTTVINAICERLFEEYPKDKNIKGQILLCAQGHDATNNVRE
RIKVEGLPTFKFGYRNTEEQYKQNERLYEQLREFAEILIESVRKKLQKLGRYENIEKILD
LEEALRRYYSSPISELEFLKEIEKNAIFLNSSMREKLSELKARQQKQEMPANLIHALRTT
QEGFEDDGVMRNYDLLESQFKENLTKEDRELLESPKPNLEKLQELKIRLLEKNAPKREYE
IPKPNEEVVSLANDLLEILSSQSPNDKRIRVLLEYLSVLERNPWDLESLLKDYNFVFSST
TGQHDKALKEKETSYFDSVIVDEAAKANPLELLMVMALAKERIILVGDDRQLPHYLDDEI
GKKLENESQDAQDEIEKALKDSMFKKLKERAQKLKELDGKEHFITLNKQYRMHPSLGQLV
SRVFYESHNEGFESPLEEEHFKHKLRFLDNKPLAWIDVKNPKERRNADGSCYRESEIATI
KKCLDLFMKDEPNFTFGVITFFSEQKRRLEQALKGYANLEIGTVDSFQGKEFDVVFLSSV
RTHYTEGFGFLKDSPRLCVALSRQKRALIVVGDREKFETPEAKDKVSGLFEFLQLCEKEG
KILVFTEEEGKIS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgctgagttttatcaaagaagatagcactatcaaggcttataatctcaacattacaaaa
ctagagccaaaagatagagaaaaatcgggattattaaagattgaagaaaataaaatatac
tttcatctagatgaaaagcgttatttggaattagagatcataggcaaagccaaagaaaaa
gaaattaaaaacgctttttgcagtaacgcctttcttgtagctcaagtcctaaatttaagt
aaaaaccaagaaagacaagttttagaattgaagtgctatttcttcaaacgccctataaaa
attcttcctgaagcattaaacattaatttcaaagacacaatcgtagaaaagttactaaaa
gatatgcgcaaagacgaaaacctagaaaattttaaagaaacttgtattttaaaaatggct
ggtttgacttattttgtgtgcgtattgccttatgaagatgagaataaagagaataaagag
aataaagagaataaagagaataaagagaataaagagaataaagagaataaagagaataaa
gagaataaagagaatagtgaagagattctagaagaagattttaggctgttaaataccaag
ggggaattaagcgttaagcacgctttgataaataataggcattcttatgaagcgataagt
ttaagacctattaaacaagagcagctagcgcctggtttgtgtttgttttttcaaggttca
ttagagtttaatgataaaaccataaaaaccatgcgaacgagccttttagttcagatccag
caagatgaaaaatcttatttaaaaatttgggaaaaatatctcatcaaaagcgctcaaaaa
agttttaatgaggcaaaagaagtgggggttttaaagattgaaagcgtggaaaaagaagga
gagaatttaaaaattcgttttaagccagctttagacaagaataaaatggaaatcttaaag
aagaaatcacaattaaaagaggggagtgatttaggggttttagaggatttagacacacaa
aatgaagaaagtttaatcaattttatttctaaacaaaataaacaaactcctccaaacaac
agcgaaataacaattaaagacattagtggggatgatttcattatagattacaatccttcc
ataaaagagggcgatgctttttatttagattatacgggggatttaaatacgcttataaag
caatatagcgcattggataaaacaaagaaaggtttgagcgctaatcctaatttagggtta
attttaaacattaaagagaataaagaggatagtgatggcgataatgacgctgcagatgcg
atagatgaagtcttaaaagagatcttatcaagttataaagcaaaagctttaggattaacc
aaaagagttaaagagaaggtttttaagaatgaccccacagaaaatcaagaaaaagccata
aatatcgctctaaatacccctgatattgctattatccaagggcctccaggaacgggtaaa
accactgtgatcaatgccatttgtgagagattgtttgaagaataccctaaggataaaaat
attaaggggcaaattttattgtgcgctcaagggcatgatgcgactaacaatgtgcgtgag
cgcatcaaagtagagggattgcccacttttaaatttggttatagaaacactgaagaacaa
tacaaacaaaatgaaagattgtatgagcaattgagggagtttgctgaaatactcatagaa
agcgtgagaaaaaaactgcaaaaattggggcgttatgaaaatatagaaaaaattttggat
ttagaagaagcccttaggcgctattatagttcgcctattagcgaattggaatttttaaaa
gaaatagaaaaaaatgcgatctttttaaattcttctatgcgtgaaaagctaagcgaatta
aaagcaaggcagcaaaaacaagaaatgcccgccaaccttatccatgctttacgcaccaca
caagaggggtttgaagatgatggagtcatgcgtaattatgatcttttagaaagccagttt
aaagaaaatcttaccaaagaagatagagagcttttggaatcgcctaagccaaatttagaa
aaattacaagagcttaaaataagattgttagaaaagaacgcccctaaaagagaatatgaa
attcctaaacccaacgaagaagtggtgtccttagccaatgacttgctagaaattctttct
tctcaaagccctaatgacaaacgcatcagagttttattggaatatctaagcgttttagaa
agaaatccatgggatttagagagcttgttaaaagattataattttgtcttttctagcacc
acagggcaacacgataaagcgctaaaagaaaaagaaacctcttattttgatagcgtgatt
gttgatgaagcggccaaggctaaccccttagagctgcttatggtgatggcgttagccaaa
gagcgcattattttggtgggcgatgacaggcaattgccgcattatttagacgatgagata
ggaaaaaaacttgaaaacgagagtcaagatgcgcaagatgagatagaaaaagccctaaag
gacagcatgtttaagaaactcaaagaaagagctcaaaagttaaaagagctagatggtaag
gagcactttattaccctaaacaagcaatacagaatgcatccctcgttggggcaattagtg
agccgtgttttttatgaatctcataatgaaggttttgaatcgcctttagaagaagagcat
ttcaaacacaaactgagatttttggataacaagcctttggcatggatagatgtcaaaaat
cccaaagaaagaaggaatgctgatggttcttgctatagggagagtgaaattgcaacaatt
aaaaaatgcttagatctttttatgaaagatgagccaaattttacttttggggtgattact
ttttttagcgagcaaaaaaggcgattagaacaagctttaaaaggatacgctaatttggag
ataggcacggtggatagctttcaaggtaaggaatttgatgttgtgtttttatcaagcgta
agaacccactatactgagggatttgggtttttaaaagactctccgcgtctgtgtgtggcc
ttgagccgccaaaaaagagcgctcattgtggtgggggatagagagaaatttgaaacacca
gaagcaaaagataaggtctcaggtctgtttgagtttttacaattatgtgaaaaagagggc
aaaattttagtttttacagaagaagaaggtaaaatttcatga
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