Helicobacter pylori Shi417: HPSH417_06000
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Entry
HPSH417_06000 CDS
T02039
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr00860
Porphyrin metabolism
hhr01100
Metabolic pathways
hhr01110
Biosynthesis of secondary metabolites
hhr01120
Microbial metabolism in diverse environments
hhr01240
Biosynthesis of cofactors
Module
hhr_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HPSH417_06000 (hemD)
Enzymes [BR:
hhr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
HPSH417_06000 (hemD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
Peptidase_S41
Motif
Other DBs
NCBI-ProteinID:
AFH98322
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Position
1258756..1259436
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AA seq
226 aa
AA seq
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MREIVWVHSQRIAPYKTLILNEFCYYPLELDPTPFNALIFTSKNAVFSLLETLKNSPKLK
ILQNIPAYALSEPTAKTLQDHHFKVAFIGEKAHGKEFVQEILPLLEKKSVLYLRAKEIAS
SLDTILLEHGIDFKQAVVYENKLKHLTLSEQNALKPKEKSILIFTAISHAKAFLHYFEFL
ENYTAISIGNTTALYLQEQGIQSYSAKKPSLEACLELALSLRVKEC
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagggagattgtatgggtgcattctcaaagaatcgccccttataagactctcatttta
aatgaattttgctactatcccttagaattagatccaaccccttttaacgcccttattttc
acttctaaaaatgcggtgttttccttgctggaaactctaaaaaacagccccaaactcaaa
attttacaaaacattcctgcttacgctttgagcgaacccaccgcaaaaactttacaagat
caccattttaaagtcgcctttataggggaaaaagcccatggcaaagagtttgttcaagaa
atccttcctttattggaaaaaaaaagcgttttgtatctcagggcaaaagagattgcttct
tctttagacaccattcttttagagcatggcattgatttcaagcaagccgttgtttatgaa
aacaagctcaaacatttaaccttaagcgaacaaaacgccctaaaacccaaagaaaagagc
atccttatttttactgccataagccatgcaaaagccttcttgcactattttgaattttta
gaaaattacaccgctataagcattggcaacacgaccgctctttatttgcaagagcaaggc
attcaaagctatagcgctaaaaagccctccttagaagcatgtttagaactggctttaagt
ttgagggttaaagaatgttaa
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