Candidatus Pantoea carbekii: HHS_02990
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Entry
HHS_02990 CDS
T02865
Name
(GenBank) hypothetical protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs00470
D-Amino acid metabolism
hhs00550
Peptidoglycan biosynthesis
hhs01100
Metabolic pathways
hhs01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HHS_02990
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HHS_02990
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HHS_02990
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhs01011
]
HHS_02990
Enzymes [BR:
hhs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HHS_02990
Peptidoglycan biosynthesis and degradation proteins [BR:
hhs01011
]
Precursor biosynthesis
Amino acid ligase
HHS_02990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
BAO00269
UniProt:
U3U7L9
LinkDB
All DBs
Position
complement(414204..415313)
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AA seq
369 aa
AA seq
DB search
MTKKRVGILCGGQSVEHEVSLQSAKNIVEAIDKQKYEVVLIAIDKQGGWHLNNTSDFLIN
TNFPSLSSLNKSNTSNIVLVFSASKRLSLYQTFIKCSKKKLLLLDIIFPILHGPLGEDGC
IQGLLRLMNIPFVGSDILGSAINMDKDCTKRLLRDAGIKVTPWVCITKTERPYINVEELV
DRFGLPLFIKPVNQGSSIGVSKVDTIEMFNTSLELAFSFDSKIIIEKNIQGREIECAILG
NAFPQASPCGEIIAKDAFYSYKTKYINPDDVQLVIPAVINDAVSQKIRSVAIKAFRILEC
TGMARVDIFLTETGDIIVNEVNTLPGFTDVSMYPKLWQVAGISYRDLITRLLELAEEYHQ
HKYNIRTSI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaacgtgtaggaatcttatgtggcggacaatccgtcgaacatgaggtttca
ttacaatctgctaaaaatattgtcgaagctattgataaacaaaaatatgaagtagtttta
atagcaattgataaacaagggggttggcatttaaataatacatccgattttttaattaat
acaaacttcccgtcactaagttcactgaataaatcaaatacatcaaatatcgtattagta
tttagtgctagtaaaagactcagtctatatcagacatttattaaatgtagcaaaaaaaag
ctattgttattagatatcatttttccaattcttcacggtccattaggggaagatggctgt
atacaaggtttattacgtttaatgaacatcccatttgtcggttctgatatcttaggttca
gcaattaatatggataaggattgtactaaacgtttactacgcgatgctggtataaaagtt
actccttgggtttgtattaccaagactgagcgtccatatattaatgtagaagaattagtt
gatcgttttggattaccattatttatcaaacctgtcaatcaaggatcttcaatcggtgtt
agtaaagttgatactatagaaatgtttaatacatctttagagttagctttttcttttgat
tctaaaatcattattgaaaaaaatattcaaggacgtgaaattgaatgtgcaatcctaggt
aatgcctttccccaagcaagtccgtgtggtgaaattatagctaaagatgctttctattct
tataaaactaaatatattaatccagatgatgtgcagttagtcatacctgctgtaatcaat
gatgcagtgagtcagaaaattcgttcagtggcaattaaagcgtttcgaatattagaatgt
acaggtatggcgcgtgtagatatatttctcacagagacaggagacattatagtaaatgaa
gtaaatacattaccaggttttactgatgttagtatgtatccgaaattatggcaagtagca
ggtattagctatagagatctgattactcgattacttgagctcgcagaagaatatcatcaa
cataagtacaatataagaactagcatataa
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