Herbaspirillum hiltneri: F506_09395
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Entry
F506_09395 CDS
T04039
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hht
Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hht03019
]
F506_09395
03009 Ribosome biogenesis [BR:
hht03009
]
F506_09395
03036 Chromosome and associated proteins [BR:
hht03036
]
F506_09395
Enzymes [BR:
hht01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
F506_09395
Messenger RNA biogenesis [BR:
hht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F506_09395
Ribosome biogenesis [BR:
hht03009
]
Eukaryotic type
90S particles
RNase
F506_09395
Prokaryotic type
rRNA processing factors
F506_09395
Chromosome and associated proteins [BR:
hht03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
F506_09395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AKZ62865
LinkDB
All DBs
Position
2082879..2083919
Genome browser
AA seq
346 aa
AA seq
DB search
MDPLVLQNRLGHNFKDATLLQQALTHRSHSSLHNERLEFLGDSILNCVVASLLFDRYNKI
DEGDLSRLRANLVKQQSLYEIAQRLDLSQFLRLGEGELKSGGFRRPSILADTLEALFGAI
FLDAGFNAARDVIRSLYIPILDTVDPKTLGKDAKTLLQEYLQGKKIPLPQYNVVATHGAA
HNQEFEIECLVPKLEIQVFGTGGSRRAGEQAAAKLALEAVQAALVKTPASTRKPRARTTQ
LKLAGIATIQPDAPNEELPPVPEAPAAKPEKLEKPVAVKTAKSEAKPDLKAEAKAETRAE
AKADLKSEPKTTEGKSDAKAQAAADLNDSRTEAPASTLSATQSKTA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggatccattagtattgcaaaatcggctggggcacaacttcaaggacgctacgttactg
cagcaggccttgacgcatcgtagccatagcagcttgcataacgaacgcctcgaattcctc
ggcgactctatcctcaactgcgtcgtcgcttcgctcctgttcgaccgttacaacaagatc
gatgaaggcgacctgtcgcgcctgcgcgccaatctcgtcaagcagcaatcgctatatgaa
atcgcccagcgcctcgacttgtcgcagtttttgcggctcggcgaaggggagttgaaatcg
ggcggtttccgccgtccgtcgattttggccgacacgctggaagcgctgttcggcgcaatt
ttcctcgacgccggcttcaatgccgcgcgcgacgtgatccgttcgctgtacattccgatc
ctcgataccgtcgatccgaagaccctcggcaaggacgccaagacgctgctgcaggaatac
ctgcaaggcaagaaaatcccgctgccgcaatacaatgtggtggctacgcacggcgcggcg
cacaatcaggaatttgaaatcgaatgcctggtacccaagctggaaatccaggtcttcggc
accggcggcagccgccgcgcaggtgaacaggccgccgccaaactggcgctggaagcggtc
caggccgctttggtcaagacgcctgcctcgacacgcaaaccgcgcgcacgcactacgcaa
ctcaagctggcgggcattgccacgatccagcctgacgcaccgaacgaggagttgccgccg
gttcccgaggcgcctgccgccaagccggaaaagctggaaaaaccggttgccgtcaagacc
gccaaaagcgaggccaagcccgacctgaaagctgaagcgaaggcggaaaccagggccgag
gcaaaagcagacctgaaatccgaaccaaaaacgaccgaaggaaaaagcgacgccaaggcc
caggccgccgccgatctgaacgattcccgcaccgaggcgccggcctcgacgctctccgca
acacaaagcaaaaccgcatga
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