Hyaena hyaena (striped hyena): 120228350 Help Entry 120228350         CDS       T07257                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism hhv  Hyaena hyaena (striped hyena) Pathway hhv04151   PI3K-Akt signaling pathway hhv04510   Focal adhesion hhv04512   ECM-receptor interaction hhv04820   Cytoskeleton in muscle cells hhv04926   Relaxin signaling pathway hhv04933   AGE-RAGE signaling pathway in diabetic complications hhv04974   Protein digestion and absorption hhv05146   Amoebiasis hhv05165   Human papillomavirus infection hhv05200   Pathways in cancer hhv05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:hhv00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     120228350 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120228350 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120228350 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     120228350 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     120228350 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     120228350 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     120228350 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     120228350 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     120228350 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     120228350 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     120228350 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:hhv04147]     120228350 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:hhv00536]     120228350 (COL4A1) Exosome [BR:hhv04147]  Exosomal proteins   Exosomal proteins of other cancer cells    120228350 (COL4A1) Glycosaminoglycan binding proteins [BR:hhv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120228350 (COL4A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  120228350 NCBI-ProteinID:  XP_039082598 LinkDB All DBs Position Unknown AA seq 1669 aa AA seqDB search MGPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGEPGPLGPPGLPGFAGNPGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGL PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGS PGFPGDAGYPGLPGREGFKGDKGEAGPPGPPGIVIGTGPLGEKGERGYPGSPGLRGEPGP KGFPGLQGQPGPPGFPVPELAGAPGFPGERGQKGDQGFPGTSLPGPSGRDGFPGPPGPPG PPGQPGHTNGIVECQPGPPGDRGAPGSPGQPGLTGEVGEKGQKGDSCLICDTAGLRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGVPGLMGQPGAKGEPGEIYFDARLK GDKGDPGFPGQPGMPGRAGAPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT GPPGPPGFGPIGPVGDKGQAGFPGNPGPPGQPGPRGEAGKVVPLPGPPGAQGLPGSPGFQ GPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG LPGNPGVPGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGNIGGPGVPGEHGAIGPPGLQGI RGDPGPPGLQGPKGAPGVPGIGPPGVMGPPGGQGPPGSSGPPGLKGEKGFPGFPGLDMPG PKGDKGSPGLPGLTGQSGLPGLPGQQGTPGLPGIPGPKGEMGVMGTPGQPGSPGPAGVPG LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG PTGDKGSRGDPGTPGMPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG TPGEKGVPGVPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGVSGFPGSPGE KGEKGSAGVPGSPGSPGPQGSPGSVGYPGSPGLPGEKGDRGLPGSSGVPGIKGEAGLPGQ PGPVGPAGQKGEPGSDGIPGSAGEKGEPGLPGRAFPGFPGAKGEKGSKGDVGFPGQAGSP GIPGSKGEQGFMGPPGPQGQPGLPGAPGHAVEGPKGDRGAQGQPGLPGLPGPMGPPGLPG LDGLKGDKGNPGWPGAPGAPGPKGEPGFQGLPGIGGSPGLTGSKGDTGLPGVPGFQGQKG PPGLQGAKGDQGDQGFPGSKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLPGPPGPK GQQGVTGSVGLPGPPGIPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGTMGPPGTP SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV HSQSIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERGEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcgtctggctgctgctgctgcccgccgcccttctgctccacgag gagcgcagccgggccgcagcgaagggtggttgtgctggctcaggctgcgggaagtgtgac tgccacggagtgaagggacagaagggtgaaagaggcctccccggcctgcagggcgtcatc ggcttccctgggatgcaggggccagaggggccgcaggggcccccgggacagaagggcgac acgggggaacccggactgcctgggacgaaggggaccaggggacccccaggagcatccggc tacccgggaaacccaggacttcctggtattccgggccaagacgggccccccggtcctcca ggtatccccggatgcaatggaacaaagggcgagccagggcctctggggcctccgggtttg cctggattcgctggaaatcccggaccgccagggttaccaggaatgaagggagaccccggg gaaataattggccacgtgcctgggaccctgttgaaaggtgaacgaggattccccggactc ccaggtgcaccgggctcgccaggtctgccagggctgcaaggtcccgttggcccccccgga tttaccggaccaccaggtcctccaggccctcctggccctccaggtgaaaaggggcaaatg ggcttaagtttccaagggccaaagggcgacaagggtgaccaaggggtcagtgggcccccg ggcgtcccaggacaagctcaagttcaagaaaaaggagactttgccactaaaggagagaag ggtcaaaaaggcgaacctggattccagggaatgccaggggttggagagaaaggggagccc ggaaagccagggccccgaggaaaaccaggcaaagatggcgaaaaaggagaaaaagggagt cctgggtttccaggcgacgcagggtacccaggcctccccggcagagaaggtttcaaggga gacaaaggtgaagcagggcccccgggtccacctggaatcgtaatcggcacgggacccttg ggagaaaaaggagagagggggtacccagggtctccagggctgagaggagagccgggcccc aaaggtttcccaggattgcaaggccagccaggccctccaggcttcccggtgccagagctc gcaggtgcccctggcttccccggtgaaagagggcagaaaggtgaccaagggtttccaggc acgtctttgccaggaccgagcggcagggacgggttcccgggtccccccgggcctccaggg ccccctggtcagccgggccacacaaatggaattgtggagtgccagcctggaccgccaggg gaccgaggagcccccggaagtccggggcagccggggttgacgggtgaagtcggagaaaaa ggccagaaaggagacagttgcctcatctgtgacacagcaggacttcgcgggcccccgggg ccgcagggacccccaggagaaataggtttcccgggacagccaggggccaagggcgacaga ggcttacccggcagagacggtctggaaggattgcctggtccgcagggtgtgccagggctg atgggccagcccggagccaagggagagcccggcgagatttacttcgatgcacggctcaaa ggagataaaggggacccgggctttccaggccagcctgggatgccaggcagagcaggtgct ccagggagagacggccatccgggtcttcccggccccaaaggctccccggggtcagtaggg ttgaaaggagagcgcgggccccctggaggagttggatttcccggcagccgcggcgacacc ggccctcctgggccccccgggtttggccccatcggccccgttggtgacaaaggacaagca ggcttcccagggaaccctgggccccccggccagccaggtcccaggggtgaagctggaaaa gttgtgcccttacctggtcccccaggagcacaaggacttccggggtccccgggtttccaa ggaccccaaggtgaccgaggttttccgggaacgccgggaagaccaggcctgccgggagag aagggtgctgttggccagcccggaatcggatttccagggcctcccggccccaaaggtgtc gatggcttacccggagatgtggggcctcctgggagtccgggtcgcccaggatttaacggc ttacctggcaaccctggtgtgcccggccagaagggggagcctggagtcggtctgcctgga ctcaaagggttgcctggtctccccggcatccccggcacccctggggagaagggaaacatc gggggaccaggcgttccgggagagcatggtgctatcggccccccaggcctccagggaatc agaggtgacccaggaccgcctggattacaaggtcccaagggagccccaggagttcccgga attggcccccccggagtgatgggcccccctggaggacagggacccccagggtcctcaggt ccccctggactgaagggagagaagggcttcccagggttcccaggcctcgacatgccaggc cccaaaggagacaaggggtccccggggctgcccggcctgacagggcagtcggggctcccc ggtcttcccggacagcagggcacgcctggccttcccggcattccaggtcccaagggagag atgggtgtcatggggaccccaggacagcccggctcgccaggtccggcgggagtgccagga ttgcccggagagaaaggggaccacggcttcccgggctcctcggggcccaggggagacccc ggcttcaagggggacaaaggagatgtgggtctcccaggcaaacccgggtccatggacaag gtggacatgggcagcatgaagggccagaagggagaccaaggagaaaaagggcagattgga ccgactggtgataaaggatcccggggagaccctggaaccccaggaatgccaggaaaggac ggccaggcgggacatccggggcagccaggacctaaaggtgaccctggcatcggcgggacc ccgggtgctccagggctccccggacccaaaggatcggttggtggcatgggcctgcctggg acacccggagaaaagggcgtgcctggggtccccgggccgcagggcgtccctggcctgccc ggggagaaaggagccaaaggcgagaaaggacaggcaggcctcccagggatcgggatcccg ggccggcctggggacaagggagaccaaggggtctcaggatttccgggaagtcctggagag aagggagagaaagggagcgcgggggtcccggggtcacccggctcccccggcccccaagga tccccagggagcgtcggctatccaggaagccccgggttgcctggagaaaagggtgacaga ggcctcccgggatcatctggcgttcccggcatcaagggagaagcaggtcttcctgggcag cccggccccgtgggcccagccggccagaaaggggagcccggcagtgacggcatcccaggg tctgcgggagagaagggggaaccaggcttgcccggaagagcgttcccagggtttccggga gccaaaggagagaaaggttcaaagggcgacgtgggattccctggacaagccgggagtcca ggaattcccggatccaaaggagagcaaggattcatgggtcccccggggccgcaaggacag ccgggcttacccggagctccgggccacgccgtggaggggcccaagggagaccggggcgca cagggtcagccgggcctgccagggctgccgggacctatggggccaccggggctccctggg cttgacggactgaaaggcgacaaaggaaacccaggctggccgggggctcccggtgctcca ggacccaagggagagccaggattccagggcctgcctggaattggcggttctccaggactc acgggctccaagggtgacacgggacttccaggagttccgggatttcaaggtcagaaaggc ccccccgggctgcagggagctaagggcgaccaaggtgaccagggcttccccggaagcaaa ggcctccctgggcccccaggccccccaggaccctatgacatcatcaaaggagagccagga ctccccggcccggagggtcccccgggtctgaaggggcttccagggccaccaggccccaaa ggacagcaaggtgtcacaggatccgtgggcttgcccggacctccagggattcccggtttt gatggggctcctggccagaagggagagaccggaccctttggcccccctggtccgaggggg tttccgggccccccaggccccgatgggttgccgggaaccatgggtcccccaggcaccccg tctgtcgatcacggcttcctggtgaccaggcacagtcagaccacagacgacccgcagtgt cctcccgggaccaaaatcctttaccacggctactccctgctctacgtgcagggcaacgag cgggcgcacggccaggacctgggcacggctgggagctgtctgcgcaagttcagtacgatg cccttcctgttctgtaacatcaacaacgtgtgcaacttcgcctcccgaaatgactactcc tactggctgtccacccctgagcccatgcccatgtcgatggcgcccatcgctggcgacaac atcagaccgttcattagcaggtgcgcggtgtgcgaggctccagccatggtgatggccgtg cacagtcagagcatccagattccgcagtgccccagcggctggtcctccctctggatcggc tattccttcgtgatgcacaccagtgccggtgccgaagggtccggccaagccctggcatcc cccgggtcctgtctggaagagttcaggagcgcgccattcatcgagtgccacggacgtggg acttgcaattactacgcaaacgcgtacagcttttggcttgccacgatcgagagaggcgag atgttcaagaagcccacgccgtccaccttgaaggccggggagctacgcacgcacgtcagc cgttgccaagtctgtatgagaagaacataa

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