Hathewaya histolytica: NCTC503_01745
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Entry
NCTC503_01745 CDS
T05971
Symbol
cshA_1
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hhw
Hathewaya histolytica
Pathway
hhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC503_01745 (cshA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhw03019
]
NCTC503_01745 (cshA_1)
03009 Ribosome biogenesis [BR:
hhw03009
]
NCTC503_01745 (cshA_1)
Enzymes [BR:
hhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC503_01745 (cshA_1)
Messenger RNA biogenesis [BR:
hhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC503_01745 (cshA_1)
Ribosome biogenesis [BR:
hhw03009
]
Prokaryotic type
rRNA helicases
NCTC503_01745 (cshA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF4391
AAA_19
DUF1694
Alpha_Helical
Motif
Other DBs
NCBI-ProteinID:
VTQ91123
UniProt:
A0A4U9RKI6
LinkDB
All DBs
Position
1:1715818..1716918
Genome browser
AA seq
366 aa
AA seq
DB search
MINFKDLGINNELIKILKISGINKPTPIQSETIPLIKSGTDIIAESQTGTGKTLSFLLPM
FENISPNSNKIQGLIITPTRELAIQITEEAIKLKKAKDINILSAYGGKDVSSQIKKLNQN
IHLVIATPGRLLDHIRRGSIDLKGIKTLVLDEADQMLLMGFKNEVESIIKKTSKKRQTLC
FSATMNSDVKKLAYRYMIDPKVISIEKEEVTLKNIKQFLIETTDREKREDLCKILNKDNA
FMAIIFCRTKRRVDELEEFMHKKGYNCEKLHGDLAQSKREKIMKSFRKCDIQYLIATDVA
SRGLDVTGVTHIYNYDMPENAESYIHRIGRTGRAGESGIAYLFTTPNDKFTLQNIEKEID
LNISTL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgataaactttaaagacttaggaattaataatgaactaataaaaatacttaaaatttca
ggtataaataagccaactccaattcaatcagaaactattcccttaataaaaagtggaact
gatattatagctgaatctcaaactggcactggaaaaactctttctttccttcttccaatg
ttcgagaatatatctcctaactcaaacaaaattcaaggtcttataataactccaacaagg
gaacttgccattcaaataactgaggaagctattaaactaaaaaaagctaaagatataaat
attctatctgcctatggcggaaaagatgtaagttctcagataaaaaaactaaatcaaaat
attcatttggtaattgcaactcctggaagacttctagatcatatacgccgtggttctata
gaccttaaaggaatcaaaaccttagtattagatgaagctgaccaaatgcttcttatgggt
tttaaaaacgaggttgaatctattataaaaaaaacttctaaaaaacgtcaaacactttgt
ttctcagcgacaatgaattctgatgtaaaaaagcttgcctataggtatatgattgatcca
aaagtgatatcaatagaaaaagaagaagtaactctaaaaaatataaagcaatttttaata
gaaactacagatagagaaaaaagagaagacttatgtaaaattctaaataaagataatgct
tttatggctattatattttgtagaacaaagagaagagttgatgaattagaagagtttatg
cataaaaaaggttataattgtgaaaaactacatggagatttagcacaatcaaaacgtgaa
aaaataatgaaatcctttagaaagtgtgatattcaatatttaatagccacagatgtagca
tcaagaggattagatgtaactggggttactcatatatataactatgatatgcctgaaaat
gcagaaagctatatacaccgtataggaagaactggaagagctggtgaaagtggaattgca
tacttgtttacaacacctaatgataaattcacattacaaaatatcgaaaaagaaattgat
ttaaatatatccactttataa
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