Haemophilus influenzae KR494 (serotype f): HifGL_001110
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Entry
HifGL_001110 CDS
T02839
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hik
Haemophilus influenzae KR494 (serotype f)
Brite
KEGG Orthology (KO) [BR:
hik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hik03032
]
HifGL_001110 (topA)
03400 DNA repair and recombination proteins [BR:
hik03400
]
HifGL_001110 (topA)
Enzymes [BR:
hik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HifGL_001110 (topA)
DNA replication proteins [BR:
hik03032
]
Prokaryotic type
DNA Topoisomerases
HifGL_001110 (topA)
DNA repair and recombination proteins [BR:
hik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HifGL_001110 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
DUF2399
Motif
Other DBs
NCBI-ProteinID:
AGV11923
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Position
1116823..1119429
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AA seq
868 aa
AA seq
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MSKSLVIVESPAKAKTINKYLGSQYVVKSSVGHIRDLPTVGSSTGEKAKPISTKGMDAEE
KAKIKAEKERNALVKRMGIDPYHDWKANYQILPGKEKVVSELKSLAKKADHIYLATDLDR
EGEAIAWHLREVIGGNDDRFSRVVFNEITKNAIKQAFEKPEQLNMDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEYWEVAVLTNNQNKQAI
RLDVTDYKGEKFDPKNQKEAQSAVDFLNVSDYVVTDLETKPTSSRPRAPFITSTLQQTAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALNMARSYIENHFGTQYLPEKPNF
YSSKENAQEAHEAIRPSDIRALPESLEGMEKDAVRLYDLIWRQFLACQMPHAQYDSSTLT
VTAGDYTLKAKGRILRFDGWTKVLPQIGKNPEDQELPSVTVSEKLALKEVQPTQHFTKPP
ARFTEAALVKELEKRGIGRPSTYAAIISTIQERGYVRTENRRFYAEKMGEIVTDRLNESF
GELMNYDFTANMEDTLDKIASGSVNWKTELNQFFKDFSSQLSKAELDELEGGMRPNNLVE
TDIKCPTCDRNMAIRTASTGVFLGCSGYALPPKERCKTTINLIPEAELLNVLDEFSETKA
LMDRKRCTKCGTAMDSYVIDAHRKIHICGNNPNCDGYLIEEGSFKIKGYDGPVVECDKCG
ADMHLKLGRFGKYMGCTNCDNTRKILKSGEVAPPKEEPVHFPELKCEKSDAYFVLRDGAS
GVFMSAHNFPKSRETRPVKIAELVQYRERLPEKLAYLADAPQKDPEENEAIVRFSRKEKK
QYVTSEKEGKATKWIVDFTNGKWVERKK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatccttggtgattgtggagtcgccagcaaaagcaaaaactattaataagtat
ttaggtagccaatatgtcgtgaaatcgagcgttggacatattcgtgatttgccgacagtt
ggttctagtacaggtgaaaaagctaaaccaatttcaaccaaaggtatggatgccgaagaa
aaggcaaaaattaaggcagaaaaggaacgtaacgccttagttaaacgtatggggattgat
ccttatcacgattggaaagcaaattatcagattttgcctggtaaagaaaaagtggtttcc
gagttaaagtcgcttgctaaaaaagcagatcacatttatctcgcaaccgacttggataga
gaaggggaagcgattgcgtggcatttacgtgaagtgattggtggtaacgatgatcgtttt
agtcgcgtggtgtttaacgaaatcactaaaaatgccattaaacaggcttttgaaaagcct
gaacaattaaatatggatcgtgttaatgctcaacaaactcgtcgttttttagatagagtg
gtgggctttatggtgtcgccattactttggaaaaaagtagctcgcgggctttctgctggt
cgagttcaatcagttgcggttaaattattagtcgaacgcgagcgtgaaattaaagcgttc
cagcctgaagaatattgggaagttgccgtccttacgaataatcaaaataaacaagctata
cgcttggatgttacggattataaaggcgagaaatttgatccaaaaaatcaaaaagaagca
caaagtgcggtagattttctgaatgtttcagattacgttgtcacagatttggaaactaag
cctacaagttctcgccctcgagcaccatttattacatcaacgcttcaacaaactgcaagt
actcgcttgggatttggcgttaagaagacaatgatgttagcccaacgtttatatgaagcg
ggttacattacttatatgcgtacggattcaaccaatttgagtcaagatgcgcttaatatg
gcgcgtagctatattgaaaatcattttggtacacaatatttaccagaaaaaccaaatttc
tattctagtaaagaaaatgcgcaagaggcacatgaggctattcgtccatcagatattcga
gcattacctgaatctttagagggaatggaaaaagacgcagtacgcctttatgatttaatt
tggcgtcaatttttagcatgtcaaatgccacatgcacaatatgatagtagcacgctgacc
gttaccgctggcgattataccttaaaagcaaagggaagaattttacgttttgatggttgg
acaaaagtattgccacagataggtaaaaatcctgaagatcaagaattgccttcagttact
gtgtcagaaaaacttgctttaaaagaagtgcaaccaacacaacactttaccaaaccacct
gctcgttttactgaagcggctttagtaaaagaattggaaaaacgtggtattggcagacct
tccacttatgcggcaattatttccaccattcaagaacgtggttatgttcgtactgaaaat
cgtcgtttctatgcagaaaagatgggcgaaattgtgactgatcgcctcaatgagtctttt
ggtgaattaatgaattacgatttcaccgcgaatatggaagatactttagataaaattgcc
tctggttcagtaaattggaaaactgaattgaatcaattctttaaggatttttctagccag
ctttctaaagctgaattagatgaacttgaaggtggtatgcgtccgaataatctcgtggaa
accgatattaaatgcccaacctgtgacagaaatatggccattcgtacggcaagtacgggg
gtatttttaggatgctcgggttatgcattgccgccaaaagagcggtgcaaaacaacgatt
aatttaattcctgaagcggaattattgaatgttttagatgaattttcagaaactaaagca
ttaatggatcgtaaacgttgtacaaaatgtggtacggcaatggacagctatgtaatcgat
gcccatcgtaaaatccatatttgcggtaataatccaaattgtgatggatatttaattgaa
gaaggctcattcaaaattaaaggttatgatggccctgttgttgagtgtgataaatgcggt
gcggatatgcatctaaaacttggtcgttttggcaagtatatgggatgtacaaattgtgat
aacacgcgcaaaattttgaaaagtggcgaggtcgcaccaccgaaagaagaaccagtacat
ttccctgagttaaaatgcgaaaaatctgatgcatattttgtattgcgtgatggtgcgagt
ggtgtatttatgtcagcccataacttccctaaatcacgcgaaacacgcccagttaaaatc
gctgaactagtgcaatatcgcgagcgtttacctgaaaaattagcttatttagccgatgct
ccacaaaaagacccagaagagaatgaagcgattgttcgttttagtcgcaaagagaaaaaa
caatatgtcacttctgaaaaagagggaaaagcgactaaatggattgttgatttcaccaat
ggaaaatgggttgaacgaaagaaataa
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