Heterobasidion irregulare: HETIRDRAFT_123228
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Entry
HETIRDRAFT_123228 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K18722
nucleoporin NUP2
Organism
hir
Heterobasidion irregulare
Pathway
hir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HETIRDRAFT_123228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_123228
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HETIRDRAFT_123228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Nucleoporin_FG
WH1
Motif
Other DBs
NCBI-GeneID:
20666815
NCBI-ProteinID:
XP_009547557
JGI:
Hetan2_123228
UniProt:
W4K4W2
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MKRGADKQLSKDDADDDVEEIDTPAQGLQKADEAALSQRKIRGLPKRSSQSPAPTLFPAV
SSSTSPFAATFKLGSSTGPTGSSQPSPFLPLLAPVASSASNATKAFASFINPAASTINTT
TTTAAKSADPTPLSDSDSTAATDDAALKYYTSLRGLNTSFLSTVSKAVESDPFLDIADVL
EQYKKHRISVQREYDDKSTRESASPAVNGSSVSAVPPAVPSSSFAFGTSSAPSAALKPPT
MPAPPTTFAGFRPAAASSSSTSFGGNFSVGPDIAAANGSQSSSFKFPSTSSAPTQSETLS
ASSAAPPKPSFSFDTPPSDSASTLKSNPFALPAKDAAPSLPFSLSGSSSSGGTSLFGLNS
ASPNTSSLFGRISSAADKPKHDDGNDDNDKPAPSPFGTSTPVKSASSSSSFGSPTNPFVF
GGGGSGSIGNPVGFGFGSPTGSGAEQSKSGSIGFSFAAPPAKAESSTDVSRDGTPLSEEG
QYDKEGEGEEEEETTHAVKASAYKMVETASGVKTWKSMGPGMLRLKKHTTTDARRVLHRT
SAMGKVTINFRIYKQMHPTLSQRSVFFTGFDDEKHGTTYQLRLRTEDDAAALLSALEREI
AFVKSSE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcggtgcagacaagcagctgtccaaggacgatgcggacgacgacgtcgaggag
attgacacgcccgctcagggtctgcagaaagccgacgaagcggccttgtcccaacgaaag
atcagaggattgcctaaacgctcatcgcaaagtccggcacccacactatttcccgccgtg
tcttcttccaccagtccctttgctgcgaccttcaaattgggctcctccacaggccccaca
ggctcctcacaaccctccccctttttacctttgttggcacctgtggcatcttcagcatcc
aacgccacgaaggctttcgcttccttcatcaacccagccgcttccaccatcaacaccacc
accactactgccgctaagtctgctgatccaacacccttatccgactccgactctactgca
gccacggatgatgcagccttgaaatactacacttcccttcgtggcctgaatacctccttc
ctatccaccgtctcgaaggccgtcgagtctgatcccttcttggacattgcagatgtgctt
gagcagtataagaaacacagaatatccgtgcagcgggaatatgacgacaaatccacccgt
gagtctgcttctcctgccgtcaatggatcgtcggtgtctgcggtcccacctgccgtgcca
tcttcttcgttcgcctttggcacgagctctgcgcccagcgctgcactcaaaccccctact
atgcctgctccaccgaccacctttgccggtttccgccccgcagctgcatcttcgtcttct
acttccttcggtggcaatttctcagttgggccggacattgcagctgccaatggcagtcaa
tcgtccagcttcaaattcccatccacgtcatccgctccaacacaatccgagacgttatct
gcgtcttcagcagctcccccaaaaccttccttctcgtttgacacccccccttccgatagc
gcttcgacgctgaaaagcaacccctttgctttaccagcaaaagacgccgcgccctcgcta
ccattctccctcagtggctcttccagcagcggtggtacctctctcttcggcctgaactcc
gcttctccaaacacgtccagcctattcggtaggatcagcagcgccgcagacaagcctaag
catgacgatggcaatgacgacaacgataagcccgctccatcgcccttcggcacatcgacc
cccgtgaagtctgcctcctcctcgagctccttcggatcacccaccaacccattcgtcttt
ggcggcggcggcagcgggagcatcggcaaccccgtcggcttcggtttcggctcccccacg
ggcagcggcgccgagcagtctaaatcgggctccatcgggttctcgttcgccgcgccgccg
gccaaagccgagtcgtcgaccgacgtgtcgcgcgacggcactcccttatcagaggaagga
caatatgataaagagggcgagggtgaggaggaagaggagacgactcatgcggtcaaggcg
agtgcatataaaatggtagagaccgccagtggggttaagacgtggaaaagcatgggtcca
ggcatgttacggttaaaaaaacacacgacaacagatgctcgtcgcgtgctccatcgaaca
agcgccatgggcaaggtcacgatcaacttccgcatctacaaacagatgcatccgacgctt
tcacaaaggagcgtcttcttcacaggatttgacgacgaaaaacacgggacgacgtatcaa
ctacgcctccgcaccgaagacgatgccgccgctctcctgagtgccctagaacgagagatc
gcgttcgtcaaaagctcagaatga
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