Heterobasidion irregulare: HETIRDRAFT_155525
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Entry
HETIRDRAFT_155525 CDS
T03455
Name
(RefSeq) Mechanosensitive ion channel
Organism
hir
Heterobasidion irregulare
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
20667577
NCBI-ProteinID:
XP_009544145
JGI:
Hetan2_155525
UniProt:
W4KGP0
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MAGHDQRSRSRLGPAHLRLFDTDDLPSPLPSPPYKSVASTSQLALHQTPPYRSRVDLMDN
DRDHDHDHDHGRVPEKPPVVLDSPRPVSAALPLAPGTATPKPTVHYTDDLAPGYSAAPSP
QPFPPFSHSRQASLAGTDDEYDEDDEYDWSAEEDLVDEEAKFEHQMGIAQRPRAWGFKRV
VTLLFGSLIGSTFLAALLVAGPVLVHFFWYKPHPTDHRRYVLDNLQAWLFWAAANLLVSW
WLALIIDLVPAVVRGVVALVWGHVSESIKTRIELFNSVKGTVKPLFYAASGWVSWVILFE
HIYNLHDSGEEAQSRAKYTNTLDNVVEFLFFLTLVWCAQKMLSHAIAFAFHRTAFKERID
ALRESLQVIEHLRNYRPKTPKHAHAHTASGTRTPVFASFGFGTPAGEKGGFEWGVRRAST
PRAGTPEPLSGMSALGGAVHTDSDWDADEEEGADGMGKGKSKGKGKGKAKDKGKGKGKKA
KRGSAGFGYDVDADADADVSANPHRYPPTPMPDGAGAARRSSEEDGGAAVVAQAARVLKN
AVLHDARNLEGKEGGAGGLVWDVTSAHEAKRLARLIYTTFKDRRRRYLLPSDLQPAYKTP
SDAARAFRVFDADDNGDLSRAEIKTTLLKVYKERRFLSRSMRDVGAALRTLDLILLFFAA
AVLFFVSLSVFDVSVGESLTSVYSIGIAASFIFKNAASNAFDAIMFLFVTHPFDTGDRCF
IDEENLVVKKMGLFATVFARSDGTETYYFNSQLFNKFITNVRRSDKTFENLTMQVAWRTP
LAKLDALERCLNEWLAREENRWFMPSTSVTLQKIDFQRHLEITIGIGHNGTWQDWGLRQA
RKTAFHAATQYYCRQLGIVAFEAALPVAWAHDRDGERGVLARADEDGDSQHSPRSPRAAS
FADAPPSPSSSSSTHARGDHHQPHAAAAPADGMGATSAGAVAAAGGTHNWLGFAPPAHAH
AGGAVLVSDMRARKSMSRKAAMRGFGLDG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccacgatcaacgctcgcgctcgcggctgggccccgcacacctccgcctcttc
gacacagacgacctcccgtccccgcttccctcgcccccctacaagtccgtcgcaagcacc
tcccagctcgccctccaccagaccccgccctaccgctcccgcgtcgacctcatggacaac
gaccgcgaccacgaccacgaccacgaccacggccgcgtccccgaaaagccccccgtcgtc
ctcgattccccccgccccgtgtccgccgccctccccctcgccccaggcaccgcgaccccc
aagcccaccgtccactacacggacgacctcgcccccggctactccgccgcgccctcgccc
cagcccttcccccccttctcccattcgcgccaggcctcgctcgcaggcacagacgacgag
tatgacgaggacgacgagtacgactggagcgccgaggaggacctcgtcgacgaggaggca
aagttcgagcaccagatgggcatcgcacagcgcccccgcgcctggggcttcaagcgcgtc
gtcaccctcctcttcggctccctcatcggctccacctttctcgccgcactcctcgtcgcc
ggccccgtcctcgtccacttcttctggtacaagccccaccccaccgaccaccgccgctac
gtcctcgacaacctccaggcctggctcttctgggccgcagccaacctcctcgtctcctgg
tggctcgccctcatcatcgacctcgtccccgcagtcgtccgcggcgtcgtcgctctcgtc
tggggccacgtctccgagagcatcaagacccgcatcgagctcttcaactccgtcaagggc
accgtaaaacccctcttttacgcggcgagcggatgggtcagctgggtcatcctctttgag
cacatatacaacctccacgactcgggcgaggaggcccagagtcgcgcaaagtacacaaac
acgctcgacaacgtcgtcgagtttttgttcttcctcaccctcgtctggtgcgcccaaaag
atgctctcgcacgcgatcgccttcgccttccaccgcaccgcgttcaaggagcgcatcgac
gcgctgcgcgagtcgctccaggtcatcgagcacctgcgcaactaccgccccaagaccccg
aagcacgcgcacgcgcacaccgcctcgggcacccgcacgcccgtctttgcctcgttcggg
ttcggcacgcccgcgggcgagaagggcgggttcgagtggggcgtgcgcagggcgagcacg
ccgcgcgcgggcacgcccgagccgcttagcggcatgagcgcgctggggggcgccgtgcac
acggacagcgattgggatgcggacgaggaggagggcgcggacggcatgggaaaaggcaag
agcaagggcaagggaaagggaaaggcgaaggacaagggcaagggcaaggggaaaaaggcg
aagcgtgggtctgccgggttcgggtacgacgtcgacgccgacgccgacgccgacgtgtcc
gcgaacccccaccgctacccgccgacgccgatgccggacggggcgggcgcggcgcggcgg
tcgagcgaggaggacggcggcgcggcggtcgtggcgcaggccgcgcgcgtgctcaagaac
gcggtgctgcacgacgcgcggaacctcgaggggaaggagggcggcgcgggcgggctggtg
tgggacgtgacgtccgcgcacgaggccaagcgcctcgcgcggctgatctacacgacgttc
aaggaccggcggcggcggtacctgctcccgtcggacctgcagccggcgtacaagacgccc
tccgacgcggcgcgcgcgttccgggtgttcgacgcggacgacaacggggacctgtcgcgg
gcggagatcaagacgacgctgctgaaggtgtacaaggagcggcggttcctgagccggtcg
atgcgcgacgtgggcgcggcgctgcgcacgctggacctgatcctgctgttcttcgccgcg
gcggtgctgttcttcgtgtcgctgtcggtgttcgacgtgagcgtgggcgagagcctgacg
agcgtgtattcgatcgggatcgcggcgagctttatctttaagaacgcggcgagcaatgcg
ttcgatgcgatcatgtttttgttcgtgacgcatccgttcgacacgggcgatcggtgcttc
atcgacgaggagaatctggtcgtgaagaagatgggcctgttcgcgacggtgtttgcgcgc
tcggacgggacggagacgtattatttcaatagccagctgttcaacaaattcatcacgaac
gtgcggcggagcgacaagacgttcgagaacctgacgatgcaggtcgcgtggcgcacgccg
ctcgcgaagctcgacgcgctcgagcggtgcctcaacgagtggctcgcgcgcgaggagaac
cgctggttcatgccctccacctccgtcacgctccagaagatcgactttcagcgccacctc
gagatcacgatcggcatcgggcacaacggcacgtggcaggactggggcctccgccaggcg
cgcaagaccgcgttccacgccgcgacgcagtactactgccgccagctcggcatcgtcgcc
tttgaggccgcgctccccgtcgcatgggcgcacgaccgcgacggcgagcgcggcgtgctc
gcgcgcgcggacgaggacggcgactcgcagcactcgccacgctcgccgcgcgccgcgtcc
ttcgctgacgcgcccccgtcgccgtcctcgtcgtcctctacacacgcgcgcggagaccat
caccagccgcacgcggcggcggcgccggcggacgggatgggcgcgacgagcgcgggggcg
gtggccgcggcgggcgggacgcacaactggctcgggttcgcgccgcctgcgcatgcgcat
gcggggggcgcggtgctcgtgtcggatatgcgtgcgcggaagagcatgagtcggaaggct
gcgatgcgcgggtttgggctggatgggtga
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