KEGG   Heterobasidion irregulare: HETIRDRAFT_237329
Entry
HETIRDRAFT_237329 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K15542  polyadenylation factor subunit 2
Organism
hir  Heterobasidion irregulare
Pathway
hir03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    HETIRDRAFT_237329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hir03019]
    HETIRDRAFT_237329
Messenger RNA biogenesis [BR:hir03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     HETIRDRAFT_237329
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A PROPPIN NBCH_WD40 WDR54 Ge1_WD40 Coatomer_WDAD IKI3
Other DBs
NCBI-GeneID: 20668775
NCBI-ProteinID: XP_009542036
JGI: Hetan2_237329
UniProt: W4KH36
LinkDB
Position
Unknown
AA seq 581 aa
LPVLLPPEVIRVPQPASFSEWTPKSYLNAPQAPPMDDAKSHDLEMAAARQMMDGKALKKT
RPRRTVDYAGGMGRWNLLRKIQPSPRYVPYLRPSPPYIVDLLPPKAYPDNASTSLCTKFV
HTSTNKIRCPVNVVVWTPEGRRILTGSTSGEFTLWNGLTFNFETILQAHDNAIRAMQFTH
SGAYLASADQSGIIKYFQPNMNNLTAWQGHREAIRGLSFSPDDNRFATASDDSTLCIWSF
EESRRERVLTGHGWDVKCVEWHPTKGLLVSGSKDNQIKFWDPRTGTSLTTLHQHKNTIQA
LAWSPNGNLVASASRDQTTRVFDIRAMKEFCILRGHKKEVCSVTWHPVHPLLVTGGSEGS
LLHWDLSLPDPALPQTLSQPRATLSQAHDSNVWALVFHPLGHLLVSASNDHTTRFWSRER
PGDASSVFSGGGEKPPAVVDTSQQDEEEAMVPGFGGGWWAKDEEPQGFGLGPPGADGPYG
QRNGFGPGGGGGGGGQNGGQNGAEDEFVLPGLGGGAEGAGTFALGRQSGPLPPQEDVFGG
DAPTGHVYHGGGGGPGEEDWQQPRRGGGNRGQRWGPRRGRY
NT seq 1743 nt   +upstreamnt  +downstreamnt
ttaccagtgcttctgccgccagaggtcatccgcgtgccacaaccagccagtttctctgaa
tggacgccaaagagctatttgaacgcaccgcaggctccacccatggacgacgcgaaaagc
catgatttagaaatggcggctgcgaggcagatgatggatggaaaggcgctcaagaagacg
cgaccgcggcggacggtggactatgctgggggcatgggccgttggaacctgttgcgcaag
atccaaccgagcccgagatatgtcccatatttgaggccaagtccaccttatatagtcgat
ctccttcctcccaaggcgtacccagacaacgcctccacctcgctgtgcaccaaattcgtc
cacacatccaccaacaaaatcagatgccccgtcaatgtcgtagtgtggacgccagaaggg
aggcggattctgacgggatccacgagcggcgagttcacgctctggaacgggctgacgttc
aacttcgagaccatcttgcaggcgcacgacaatgcgattcgcgcgatgcagttcacgcac
tctggcgcatatctggcgtccgcagaccagagcggcatcatcaagtactttcagcccaac
atgaacaacctgactgcgtggcagggccatcgcgaggccatccgcggtctcagcttcagc
ccggacgacaaccgtttcgcgaccgcaagcgacgattcgacgctctgcatctggtcgttt
gaggaaagccggagagagagagttctcacgggacacgggtgggacgtcaagtgcgtcgaa
tggcatcctaccaaagggctcctagtctctgggagcaaggataaccagatcaaattctgg
gatccgcgaacggggacctcgctcaccaccttacaccaacacaagaacaccatccaagcc
ctcgcctggtcgcccaacgggaacctcgtcgccagcgcgtcccgagaccagaccacccgc
gtgttcgacatccgcgcgatgaaggaattctgcatcctccgcgggcacaaaaaagaagtc
tgctcggtcacatggcaccccgtgcacccgctcctcgtcacgggcggctccgaaggctcg
ctgctgcactgggacctctccctgccggaccccgcgctcccacagacgctctcgcagccg
cgcgcgacgctctcacaggcgcacgactcgaacgtgtgggcgctcgtgttccacccgctc
gggcacctcctcgtgagcgcctccaacgaccacacgacgcgcttctggtcgcgcgagcgc
cccggcgacgcgtcctccgtgttttcgggcggcggggagaagccgcccgccgtcgtcgac
acgagccagcaggacgaggaggaggcgatggtgcccgggttcggcggcggctggtgggcg
aaggacgaggagccgcaggggttcgggctgggcccgccgggcgccgacgggccgtacggg
cagcgcaacgggttcgggcccggcggtggcggcggcggcggggggcagaacggcgggcag
aacggcgcagaggacgagtttgtgctccccgggctcggcggcggcgcggagggcgccggg
acgttcgcgttggggcgccagagcgggccgctgccgccgcaggaggacgtgtttgggggg
gacgcgccgacgggccacgtttatcatggtggcgggggtgggcccggagaggaggactgg
cagcagccgcgccggggcgggggcaatcggggacagaggtggggtccgcggagggggcgg
tat

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