Heterobasidion irregulare: HETIRDRAFT_308152
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Entry
HETIRDRAFT_308152 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
hir
Heterobasidion irregulare
Pathway
hir03013
Nucleocytoplasmic transport
hir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HETIRDRAFT_308152
09122 Translation
03013 Nucleocytoplasmic transport
HETIRDRAFT_308152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_308152
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_308152
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
HETIRDRAFT_308152
Spliceosome [BR:
hir03041
]
Complex C
Other components
EJC/TREX
HETIRDRAFT_308152
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
HETIRDRAFT_308152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
20669550
NCBI-ProteinID:
XP_009540569
JGI:
Hetan2_308152
UniProt:
W4KLI4
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MITSTERALSSLLKQLPPPPADESTLEHLVRKTLEELPSRSTPDIRKSQWEYALKNEIFA
LAANEGAALNDPETNYYRQLMVRLDLVLTFTEHDACEPSFPLTTLQDLLETQTITSCSHI
FSWIESRAARLTQGMVPQKGKALVLLRTLNDLLRRLSKMGSNTIFCGRILTFLSGVFPLG
ERSGVNLRGEYGPIWEGAQLKAKDEKKEQTEASSDVDEKAELDAMQVDELKPDSQKAPPS
PSKLAEKKSEKREVFYNTFWSLQLPFSRPPLFSAPETFADFKEAVIKVMPIIKEASAKER
TLMGNRSHGSAGAAPLKRKREADAGEEPTSNDYFFAKFLTSPELLDLEVADTHFRRQFLF
QLLILLTHLLTFTKSAKLSWQTPRNRSLQIEFTLEPSDAQWVQETITKTLDELKQTTPGG
RAFADSVHIILEREKNWVRWKNEMCTPFDREPYSQEVDGMKVGLEEATREARIKMRVEPP
EWEHVLGSAPLTEIWEMGYRDLSDLQRPFQPGDVRDFVKKVKLEDNRIEMRKKTLARQAE
RIAQARAKATAAAANPVSEAKEAAVPTTPAAVDAARTATSTGDQNLLMHPSLPAKPVTSP
KSAGAPGTAPVSSPTPVQAPLPPPVIPTPTPAPAVTAPSAPSVPMPAVTPTPAPIQPALP
PDDQIIKLEENKHRWSWLALRTARDRYLAHFGKIGTGDIILLAQEIEKEEKAEKERIARG
PNGDGSGSLAPSMTGAGEERAASVNDTDGDAPTGNADGYMKMETT
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgattacctccaccgaacgggctctttcgtctcttctgaaacaacttcctccgccaccg
gccgatgagagtacgctagaacatcttgttcgtaaaacgctagaagaactaccatccagg
agtactcctgacattcgaaagagccaatgggagtacgcgttgaagaatgagatattcgct
ttggctgccaatgaaggagcggcgttaaacgatccggaaacgaattactaccgccaattg
atggtcaggttggatctggtcctcacgttcacagagcatgatgcctgtgaaccatcattc
cctcttacaactcttcaagacttgttggaaacccagaccatcacgtcatgttcacacatc
ttctcgtggatcgaatctcgcgctgcccggctcacccagggcatggtgccccaaaaggga
aaagccctggtccttcttcgcactctcaatgatcttctccgtcgactatcgaagatgggg
tcgaataccatcttttgtggtcgaatcttgacgttcttgagcggcgtgttcccacttgga
gagaggagtggtgtcaacttgcgtggagagtatgggccaatatgggaaggtgctcagctg
aaagcgaaggatgagaagaaagagcagaccgaagcttcttcagacgtcgatgagaaggca
gagctagacgcaatgcaagtcgacgagctcaagcccgactcccagaaggctcctccatct
ccttcgaagcttgcggaaaagaagagtgagaagagagaagtattctacaacacattctgg
tctctccagctccccttctcgcggcctcctcttttttccgcccccgagactttcgcagac
ttcaaagaagcagtcatcaaagtcatgcccatcatcaaagaggcaagtgccaaagaaagg
acactcatgggcaaccgttcacatggttcagccggtgctgctcccctcaagcggaaacgc
gaagctgatgctggcgaagagcccactagtaacgactatttctttgcgaaattcttgacc
agtcctgaactgcttgaccttgaggtcgcagacacccatttccgccgccaattcctcttt
cagctgttgattcttcttactcatctcctcacatttacaaagtccgccaaactgtcttgg
caaacacctcggaaccgctctctccaaatcgagttcacgctcgaaccatccgatgcacaa
tgggttcaagagaccatcacaaaaactcttgacgagctcaagcagacgacaccaggtggt
agggcatttgcggatagtgtgcacataatcttagagcgggagaagaattgggttcgctgg
aagaacgagatgtgtactccatttgatcgcgaaccttattctcaagaggtcgatgggatg
aaggttgggttggaggaggccaccagagaggcgaggattaaaatgagagtcgaacctcca
gaatgggagcacgtccttgggtctgcacctttgaccgagatctgggagatgggatatagg
gacttgtcggaccttcaacgaccattccaaccaggagatgtgagggacttcgtgaagaaa
gtcaaattggaagataaccgcatagaaatgcgcaagaaaacgcttgcacgacaagcagag
cgcattgcccaggcacgcgccaaagcaaccgcagcggcggcgaatcctgtctctgaggct
aaggaagctgccgtccctacaacgccagcggctgtggatgctgctcggaccgctacttca
actggtgatcaaaatcttcttatgcacccttcccttccggcgaaacctgtaacgtcgccg
aaatcggcgggggcgcccggtacggcccccgtatcgtccccaacgcctgtacaagcgcca
ttaccaccgcctgtaatacccacgccgacgcctgctccagcagtcactgcgccgtctgct
cctagcgttccaatgcctgcagtgacgcccacccctgcaccaattcaaccggcattgcct
ccggatgatcaaattatcaaactcgaagagaacaaacaccgttggtcatggctcgctctg
cgcactgctcgtgaccgatacctggcgcattttgggaagatcggaacgggtgacatcatc
ctccttgcacaggagattgagaaagaggaaaaggcagagaaggagcggattgcgcggggt
ccaaatggagacggctcaggaagtttggcgcccagcatgactggggctggggaggagaga
gctgcgagtgtgaatgatacggacggagatgcccccacgggaaacgcggatggatacatg
aaaatggagacgacatga
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integrated database retrieval system
