Heterobasidion irregulare: HETIRDRAFT_431107
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Entry
HETIRDRAFT_431107 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K23039
nuclear polyadenylated RNA-binding protein NAB2
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_431107
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
HETIRDRAFT_431107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_2
Nab2-zf4
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
20674507
NCBI-ProteinID:
XP_009553378
JGI:
Hetan2_431107
UniProt:
W4JPA4
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MVFGLTIGTERATALQNSIQDELMKRGYSPDADPVMAEYITIMIINNKTAAQISIELEDL
IGADFERSFTDWLFSEAAKGAPKEATSDLEPSHEPVPSLPSETPTREAVPHIPAEPLRRN
PPSGPRNGAPLYQQAISQAIPSHSPTAQKRSASARSPSPGPNKIRRTDVPVGPRAMLRDG
QLGHGHGGPRSLLERVGGPAGGRANRDDIQQRIDSITNASADPNMQAALAAGYLPQNGMD
MNAMAAQMGMGGSANPMMLQEMMMNQMALMAQMATSLGMLNPAQGQFGGGFPMQGGMPDM
GMFNGMQGFQGPGQPQQMVGGGGERNRGSGRGGRGFGRGRGQPSSSHTGRSEAITNNEKA
STVSQHVVNAEPPRPIPPNTIEAPAVATPVPTTPQPPRPAFAIPDRPQSPTLCKYALKCT
NAHCRWSHPSPVATAESGMVLSNEACEQGKNCKDKDCIKAHVSPAAVNPQAVVEQAKPPL
AVPTSGAVACRYGAACTRQGCTFQHPVNKSTHIATSCRFGSGCTRASCPFQHPEGRVLPT
AFHRGLSTTAPIVNVSTPQTGTMGGASHHRSVTFNKPGSKEALEQKVKEIEEKKTQAEAA
VKQAEAAAGGKKDDSKPVAIAA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggttttcggtcttactatcggtacagagcgggcaaccgctttgcagaattctattcag
gatgagcttatgaaacgaggttacagtcctgatgctgatcctgtcatggcggaatacatc
accataatgatcataaacaacaagacggctgctcagatatcaattgaactcgaggacttg
ataggtgcagacttcgaacgaagcttcacagattggttgttttcagaagcagccaaaggc
gcaccaaaagaagcgacatctgatcttgagccctcccacgaaccagtaccctctctcccc
tctgaaactcccactcgcgaagctgtcccccatatccccgccgaaccactccgaagaaac
cctccaagtggtcctcgtaatggcgctcctctgtatcagcaagcgatctctcaagctata
ccttctcattccccgacagcgcagaaacgttctgcgtcggctcgttcaccttcgccagga
ccgaacaagatacgacgtaccgatgttcctgtggggccgagggcgatgctgcgggatggg
cagcttgggcatgggcacggtggccccagaagtttgttggagagggtcgggggtccagca
ggaggtagagcgaatagggatgacatccagcagcggatcgacagtatcaccaatgcctcg
gccgatcccaatatgcaagctgcgcttgctgccggatacctgccacaaaatggcatggac
atgaatgcgatggctgctcaaatgggtatgggagggtctgcgaatcctatgatgttgcag
gagatgatgatgaaccaaatggcgctcatggcacagatggcaacgagcttggggatgctc
aatcccgcgcagggtcagttcggcggtggatttcctatgcaaggaggaatgccggatatg
gggatgttcaacggtatgcaaggttttcagggtccgggacagccgcaacagatggtcggt
ggcggtggcgagagaaatcgtggatctggaagaggaggaagagggtttggccgtggaaga
ggacaaccatcttcgtcgcatactgggcgctcggaagccattacgaataacgagaaagca
tccacagtttctcagcatgtggtcaatgcagaacctccacggccaatacccccaaacaca
atcgaagcgccggctgtcgctactccagtccctaccacgcctcagccccctcgacctgca
ttcgctattcctgaccgtccacagtctccaacgctgtgtaaatacgcgttgaagtgtaca
aacgcccattgtcggtggtctcatccgtcgccagtcgccactgcagagagtggtatggtg
ttaagcaatgaggcctgtgaacaggggaaaaactgcaaggataaggattgcatcaaggcg
cacgtcagtcctgctgccgtcaatccacaagcagttgtagaacaggcgaaacctcctctc
gctgtgcccacttctggagctgttgcttgccgatacggagctgcatgcacccgccaagga
tgtaccttccagcatccggtcaacaagagcactcacattgctacgtcgtgtcgctttgga
tctggctgcactcgtgcttcgtgtccattccaacacccggaaggacgagtactcccaaca
gcattccatcgagggctttcgacaaccgctcccatcgtgaacgtgtccacgcctcagaca
ggaaccatgggaggcgcgagtcaccaccgcagcgtcactttcaacaagcctgggagcaag
gaagcgctggagcaaaaggtgaaggagatcgaagagaagaaaactcaggctgaagcggcg
gtcaagcaagcggaggccgctgctggggggaagaaggatgattcgaagccggtggcgatc
gctgcatag
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